Chitwan-1-SW

PSP 10002

DNA Source: SporeWorks

General Information

Accession Date
May 31, 2021
Report Type
Whole-Genome Sequencing
DNA Source Website
sporeworks.com

Genetic Information

These charts represent the Illumina sequence coverage over the Psilocybin synthase genes.

Psilocybin Synthase Gene Coverage

Learn more about read coverage plots.

Read Coverage
No. of Contigs (>= 25K bp)
376
No. of Contigs (>= 50K bp)
148
Total Length (>= 25K bp)
23,349,709
Total Length (>= 50K bp)
15,430,988
Total Contigs
15,121
Largest Contig
490,917
Total Length
49,765,968
GC (%)
45.63
N50
20,914

Learn more about blob plots.

Blob Plot

Variants

PsiR c.1031C>T p.Ala344Val missense variant moderate CM039007.1 1655743

IGV: Start, Jump

G/A
PsiT1 c.362A>G p.Glu121Gly missense variant & splice region variant moderate CM039007.1 1663786

IGV: Start, Jump

A/G
PsiT1 c.640A>C p.Ile214Leu missense variant moderate CM039007.1 1664184

IGV: Start, Jump

A/C
PsiT1 c.737C>T p.Thr246Ile missense variant moderate CM039007.1 1664333

IGV: Start, Jump

C/T
PsiT1 c.798A>T p.Arg266Ser missense variant moderate CM039007.1 1664394

IGV: Start, Jump

A/T
PsiT1 c.802C>A p.Leu268Ile missense variant moderate CM039007.1 1664398

IGV: Start, Jump

C/A
PsiT1 c.1156A>G p.Thr386Ala missense variant moderate CM039007.1 1664803

IGV: Start, Jump

A/G
PsiT1 c.1513A>G p.Ile505Val missense variant moderate CM039007.1 1665277

IGV: Start, Jump

A/G
PsiT1 c.1616A>G p.His539Arg missense variant moderate CM039007.1 1665560

IGV: Start, Jump

A/G
PsiT1 c.1626G>A p.Met542Ile missense variant moderate CM039007.1 1665570

IGV: Start, Jump

G/A
PsiT1 c.1687A>C p.Ile563Leu missense variant moderate CM039007.1 1665631

IGV: Start, Jump

A/C
PsiT1 c.1690G>A p.Val564Ile missense variant moderate CM039007.1 1665634

IGV: Start, Jump

G/A
PsiT1 c.1714A>G p.Asn572Asp missense variant moderate CM039007.1 1665658

IGV: Start, Jump

A/G
PsiT1 c.1720+1G>T splice donor variant & intron variant high CM039007.1 1665665

IGV: Start, Jump

G/T
PsiT1 c.1735G>A p.Val579Ile missense variant moderate CM039007.1 1666040

IGV: Start, Jump

G/A
PsiT1 c.1736T>C p.Val579Ala missense variant moderate CM039007.1 1666041

IGV: Start, Jump

T/C
PsiT1 c.2005C>T p.Arg669Trp missense variant moderate CM039007.1 1666373

IGV: Start, Jump

C/T
PsiT1 c.2038T>G p.Ser680Ala missense variant moderate CM039007.1 1666406

IGV: Start, Jump

T/G
PsiT1 c.2065T>G p.Leu689Val missense variant moderate CM039007.1 1666433

IGV: Start, Jump

T/G
PsiT1 c.2237A>G p.Glu746Gly missense variant moderate CM039007.1 1666605

IGV: Start, Jump

A/G
PsiT1 c.2254A>G p.Arg752Gly missense variant moderate CM039007.1 1666622

IGV: Start, Jump

A/G
PsiT1 c.2573A>T p.Gln858Leu missense variant moderate CM039007.1 1666941

IGV: Start, Jump

A/T
PsiM c.305G>A p.Arg102Lys missense variant moderate CM039007.1 1674573

IGV: Start, Jump

C/T
PsiD c.66G>T p.Leu22Phe missense variant moderate CM039007.1 1677485

IGV: Start, Jump

C/A

Nearest genetic relatives (All Samples)

0 0.092 0.183 0.275 0.367
  1. 0.323 Z-strain-1-Mush (PSP10083)
  2. 0.330 Arenal-Volcano-1-Mush (PSP10059)
  3. 0.331 Luminous-lucies-2-PS (PSP10032)
  4. 0.331 Luminous-lucies-3-PS (PSP10033)
  5. 0.331 Luminous-lucies-1-PS (PSP10034)
  6. 0.334 Roatan-Honduras-4-Mush (PSP10079)
  7. 0.338 Treasure-Coast-2-Mush (PSP10082)
  8. 0.338 ColumbiaRust-1-SW (PSP10021)
  9. 0.338 Costa-Rica-3-redo-SW (PSP10024)
  10. 0.339 Treasure-coast-3-PS (PSP10056)
  11. 0.339 Treasure-coast-2-PS (PSP10055)
  12. 0.339 Treasure-coast-1-PS (PSP10054)
  13. 0.340 Tosohatchee-print-ITW (PSP10081)
  14. 0.340 MGC 2016 unknown strain (PSP10012)
  15. 0.349 Penvy-2-SW (PSP10075)
  16. 0.350 Penvy-Col5-PS (PSP10044)
  17. 0.350 Penvy-1-PS (PSP10045)
  18. 0.350 Penvy-Col4-PS (PSP10043)
  19. 0.350 Orissa-India-4-Mush (PSP10073)
  20. 0.351 Guapile-ITW-col-WM (PSP10132)

Most genetically distant strains (All Samples)

0 0.150 0.300 0.450 0.600
  1. 0.585 Bplus-3-PS (PSP10001)
  2. 0.583 GoldenCoast-BAF-A1-UM (PSP10105)
  3. 0.583 True-Albino-Teacher-ITW-WM (PSP10140)
  4. 0.582 GoldenCoast-BAF-A2-UM (PSP10106)
  5. 0.582 Avery-Albino-ITW-WM (PSP10123)
  6. 0.581 GoldenCoast-BAF-B1-UM (PSP10107)
  7. 0.580 Orissa-India-ITW (PSP10071)
  8. 0.580 GoldenCoast-BAF-B2-UM (PSP10108)
  9. 0.579 Bplus (PSP10088)
  10. 0.579 HUA-Early (PSP10092)
  11. 0.578 Gulf-Coast-BAF (PSP10090)
  12. 0.578 Burma-1-SW (PSP10020)
  13. 0.578 Gulf-Coast (PSP10091)
  14. 0.577 McKennaii-1-PS (PSP10069)
  15. 0.577 Ecuador-3-SW (PSP10025)
  16. 0.576 GoldenCoast-UM (PSP10109)
  17. 0.576 Bplus-3-redo-SW (PSP10016)
  18. 0.576 Bplus-1-redo-SW (PSP10014)
  19. 0.576 Bplus-2-redo-SW (PSP10015)
  20. 0.576 GoldenTeacher-3-SW (PSP10029)

Blockchain Registration Information

Transaction ID
fcdef402fb3fd8075fa60871a74398dfd53edb3abd9257280abdb9cd346c25a3
Stamping Certificate
Download PDF (39.6 KB)
SHASUM Hash
443e8ba6c0ed518276dace50a2ce65d578bbf384148d9afc1ee7c7f96813fcc1
QR code for PSP10002

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