Golden-Teacher_Denver

PSP 10011

DNA Source: Medicinal Genomics

General Information

Accession Date
May 31, 2021
Report Type
Whole-Genome Sequencing

Genetic Information

These charts represent the Illumina sequence coverage over the Psilocybin synthase genes.

Psilocybin Synthase Gene Coverage

Learn more about read coverage plots.

Read Coverage
No. of Contigs (>= 25K bp)
343
No. of Contigs (>= 50K bp)
118
Total Length (>= 25K bp)
18,327,033
Total Length (>= 50K bp)
10,647,088
Total Contigs
13,520
Largest Contig
293,722
Total Length
47,880,623
GC (%)
45.94
N50
14,416

Learn more about blob plots.

Blob Plot

Variants

PsiT1 c.362A>G p.Glu121Gly missense variant & splice region variant moderate CM039007.1 1663786

IGV: Start, Jump

A/G
PsiT1 c.640A>C p.Ile214Leu missense variant moderate CM039007.1 1664184

IGV: Start, Jump

A/C
PsiT1 c.1735G>A p.Val579Ile missense variant moderate CM039007.1 1666040

IGV: Start, Jump

G/A
PsiT1 c.1736T>C p.Val579Ala missense variant moderate CM039007.1 1666041

IGV: Start, Jump

T/C
PsiT1 c.2254A>G p.Arg752Gly missense variant moderate CM039007.1 1666622

IGV: Start, Jump

A/G
PsiH c.20C>T p.Ser7Phe missense variant moderate CM039007.1 1667530

IGV: Start, Jump

C/T
PsiM c.305G>A p.Arg102Lys missense variant moderate CM039007.1 1674573

IGV: Start, Jump

C/T
PsiD c.617G>A p.Gly206Asp missense variant moderate CM039007.1 1676885

IGV: Start, Jump

C/T
PsiD c.616G>A p.Gly206Ser missense variant moderate CM039007.1 1676886

IGV: Start, Jump

C/T
PsiD c.66G>T p.Leu22Phe missense variant moderate CM039007.1 1677485

IGV: Start, Jump

C/A

Nearest genetic relatives (All Samples)

0 0.075 0.150 0.225 0.300
  1. 0.228 Thailand-Koh-Samui-1-Mush (PSP10080)
  2. 0.240 BM1-UM (PSP10098)
  3. 0.252 BM16 (PSP10087)
  4. 0.269 Ecuador-3-PS (PSP10061)
  5. 0.269 PES-2-SW (PSP10008)
  6. 0.270 Z-strain-3-PS (PSP10084)
  7. 0.270 Blue-Magnolia-Rust-UM-WM (PSP10127)
  8. 0.272 GoldenTeacher-1-SW (PSP10027)
  9. 0.274 GoldenTeacher-3-SW (PSP10029)
  10. 0.274 Ecuador-3-SW (PSP10025)
  11. 0.274 Golden-Teacher (PSP10089)
  12. 0.275 GoldenTeacher-2-SW (PSP10028)
  13. 0.275 Maui-2-PS (PSP10041)
  14. 0.276 Maui-3-PS (PSP10042)
  15. 0.276 Maui-1-PS (PSP10040)
  16. 0.277 Huautla-3-PS (PSP10005)
  17. 0.278 GoldenCoast-BAF-B2-UM (PSP10108)
  18. 0.278 GoldenCoast-BAF-B1-UM (PSP10107)
  19. 0.278 Gulf-Coast (PSP10091)
  20. 0.278 Gulf-Coast-BAF (PSP10090)

Most genetically distant strains (All Samples)

0 0.142 0.283 0.425 0.567
  1. 0.540 Penvy-1-PS (PSP10045)
  2. 0.540 Penvy-Col5-PS (PSP10044)
  3. 0.540 Penvy-Col4-PS (PSP10043)
  4. 0.539 Penvy-2-SW (PSP10075)
  5. 0.520 Costa-Rica-1-redo-SW (PSP10022)
  6. 0.516 Costa-Rica-2-redo-SW (PSP10023)
  7. 0.489 Bplus-ITW-WM (PSP10129)
  8. 0.488 Guapile-ITW-col-WM (PSP10132)
  9. 0.487 WFB-UM-WM (PSP10121)
  10. 0.484 WFB-UM (PSP10112)
  11. 0.482 ColumbiaRust-1-SW (PSP10021)
  12. 0.478 Treasure-coast-1-PS (PSP10054)
  13. 0.478 Treasure-coast-3-PS (PSP10056)
  14. 0.478 Treasure-coast-2-PS (PSP10055)
  15. 0.476 Treasure-Coast-2-Mush (PSP10082)
  16. 0.475 Tosohatchee-print-ITW (PSP10081)
  17. 0.472 Costa-Rica-3-redo-SW (PSP10024)
  18. 0.465 Orissa-India-1-Mush (PSP10072)
  19. 0.454 Samui-1-redo-PS (PSP10047)
  20. 0.451 Roatan-Honduras-4-Mush (PSP10079)

Blockchain Registration Information

Transaction ID
b5c841e7e6d5d21a25c752a1ea7bb126dd9186affbb4ccd648d9264b173d2f3d
Stamping Certificate
Download PDF (39.7 KB)
SHASUM Hash
c6cd509c83d6901ea634fc4b856dae08407adb8bb9939e6036210468f868338b
QR code for PSP10011

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