Burma-1-SW

PSP 10020

DNA Source: SporeWorks

General Information

Accession Date
May 11, 2021
Report Type
Whole-Genome Sequencing
DNA Source Website
sporeworks.com

Genetic Information

These charts represent the Illumina sequence coverage over the Psilocybin synthase genes.

Psilocybin Synthase Gene Coverage

Learn more about read coverage plots.

Read Coverage
No. of Contigs (>= 25K bp)
424
No. of Contigs (>= 50K bp)
206
Total Length (>= 25K bp)
29,825,594
Total Length (>= 50K bp)
21,860,498
Total Contigs
2,635
Largest Contig
418,815
Total Length
40,068,369
GC (%)
46.13
N50
60,029

Learn more about blob plots.

Blob Plot

Variants

PsiT1 c.362A>G p.Glu121Gly missense variant & splice region variant moderate CM039007.1 1663786

IGV: Start, Jump

A/G
PsiT1 c.640A>C p.Ile214Leu missense variant moderate CM039007.1 1664184

IGV: Start, Jump

A/C
PsiT1 c.1735G>A p.Val579Ile missense variant moderate CM039007.1 1666040

IGV: Start, Jump

G/A
PsiT1 c.1736T>C p.Val579Ala missense variant moderate CM039007.1 1666041

IGV: Start, Jump

T/C
PsiT1 c.2254A>G p.Arg752Gly missense variant moderate CM039007.1 1666622

IGV: Start, Jump

A/G
PsiH c.20C>T p.Ser7Phe missense variant moderate CM039007.1 1667530

IGV: Start, Jump

C/T
PsiM c.305G>A p.Arg102Lys missense variant moderate CM039007.1 1674573

IGV: Start, Jump

C/T
PsiD c.617G>A p.Gly206Asp missense variant moderate CM039007.1 1676885

IGV: Start, Jump

C/T
PsiD c.616G>A p.Gly206Ser missense variant moderate CM039007.1 1676886

IGV: Start, Jump

C/T
PsiD c.66G>T p.Leu22Phe missense variant moderate CM039007.1 1677485

IGV: Start, Jump

C/A

Nearest genetic relatives (All Samples)

0 0.033 0.067 0.100 0.133
  1. 0.040 Cambodian--1-PS (PSP10060)
  2. 0.045 True-Albino-Teacher-ITW-WM (PSP10140)
  3. 0.053 Avery-Albino-ITW-WM (PSP10123)
  4. 0.058 Bplus-2-redo-SW (PSP10015)
  5. 0.059 Bplus-1-redo-SW (PSP10014)
  6. 0.059 Bplus-3-redo-SW (PSP10016)
  7. 0.061 Bplus (PSP10088)
  8. 0.062 Bplus-3-PS (PSP10001)
  9. 0.064 Maui-2-PS (PSP10041)
  10. 0.064 Orissa-India-ITW (PSP10071)
  11. 0.065 Maui-3-PS (PSP10042)
  12. 0.065 HUA-Early (PSP10092)
  13. 0.065 Maui-1-PS (PSP10040)
  14. 0.066 McKennaii-1-PS (PSP10069)
  15. 0.067 GoldenCoast-BAF-A1-UM (PSP10105)
  16. 0.068 Huautla-3-PS (PSP10005)
  17. 0.068 GoldenTeacher-3-SW (PSP10029)
  18. 0.068 GoldenCoast-BAF-A2-UM (PSP10106)
  19. 0.069 Huautla-3-redo-SW (PSP10031)
  20. 0.069 Ecuador-3-SW (PSP10025)

Most genetically distant strains (All Samples)

0 0.183 0.367 0.550 0.733
  1. 0.710 Penvy-1-PS (PSP10045)
  2. 0.710 Penvy-Col4-PS (PSP10043)
  3. 0.710 Penvy-Col5-PS (PSP10044)
  4. 0.709 Penvy-2-SW (PSP10075)
  5. 0.653 Costa-Rica-1-redo-SW (PSP10022)
  6. 0.651 Costa-Rica-2-redo-SW (PSP10023)
  7. 0.647 Treasure-coast-1-PS (PSP10054)
  8. 0.647 Treasure-coast-2-PS (PSP10055)
  9. 0.647 Treasure-coast-3-PS (PSP10056)
  10. 0.646 Treasure-Coast-2-Mush (PSP10082)
  11. 0.622 Costa-Rica-3-redo-SW (PSP10024)
  12. 0.611 Bplus-ITW-WM (PSP10129)
  13. 0.606 ColumbiaRust-1-SW (PSP10021)
  14. 0.606 Arenal-Volcano-1-Mush (PSP10059)
  15. 0.605 Orissa-India-1-Mush (PSP10072)
  16. 0.605 Orissa-India-4-Mush (PSP10073)
  17. 0.603 Luminous-lucies-2-PS (PSP10032)
  18. 0.602 Luminous-lucies-3-PS (PSP10033)
  19. 0.602 Luminous-lucies-1-PS (PSP10034)
  20. 0.601 Roatan-Honduras-4-Mush (PSP10079)

Blockchain Registration Information

Transaction ID
3b4a41e73022ea0709c4e0068e4ca2425e3edb1616a96af02e566b37106d3c78
Stamping Certificate
Download PDF (39.7 KB)
SHASUM Hash
bf84cc22813d35d1f4576637c05f6151f39b1db77c1290aaddbfcfb1aa5b042b
QR code for PSP10020

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