Costa-Rica-3-redo-SW

PSP 10024

DNA Source: SporeWorks

General Information

Accession Date
May 11, 2021
Report Type
Whole-Genome Sequencing
DNA Source Website
sporeworks.com

Genetic Information

These charts represent the Illumina sequence coverage over the Psilocybin synthase genes.

Psilocybin Synthase Gene Coverage

Learn more about read coverage plots.

Read Coverage
No. of Contigs (>= 25K bp)
0
No. of Contigs (>= 50K bp)
0
Total Length (>= 25K bp)
0
Total Length (>= 50K bp)
0
Total Contigs
33,026
Largest Contig
12,055
Total Length
27,855,976
GC (%)
45.92
N50
851

Learn more about blob plots.

Blob Plot

Variants

PsiT1 c.362A>G p.Glu121Gly missense variant & splice region variant moderate CM039007.1 1663786

IGV: Start, Jump

A/G
PsiT1 c.640A>C p.Ile214Leu missense variant moderate CM039007.1 1664184

IGV: Start, Jump

A/C
PsiT1 c.668C>G p.Ser223* stop gained high CM039007.1 1664264

IGV: Start, Jump

C/G
PsiT1 c.737C>T p.Thr246Ile missense variant moderate CM039007.1 1664333

IGV: Start, Jump

C/T
PsiT1 c.798A>T p.Arg266Ser missense variant moderate CM039007.1 1664394

IGV: Start, Jump

A/T
PsiT1 c.1156A>G p.Thr386Ala missense variant moderate CM039007.1 1664803

IGV: Start, Jump

A/G
PsiT1 c.1377T>A p.Phe459Leu missense variant moderate CM039007.1 1665085

IGV: Start, Jump

T/A
PsiT1 c.1513A>G p.Ile505Val missense variant moderate CM039007.1 1665277

IGV: Start, Jump

A/G
PsiT1 c.1616A>G p.His539Arg missense variant moderate CM039007.1 1665560

IGV: Start, Jump

A/G
PsiT1 c.1626G>A p.Met542Ile missense variant moderate CM039007.1 1665570

IGV: Start, Jump

G/A
PsiT1 c.1687A>C p.Ile563Leu missense variant moderate CM039007.1 1665631

IGV: Start, Jump

A/C
PsiT1 c.1690G>A p.Val564Ile missense variant moderate CM039007.1 1665634

IGV: Start, Jump

G/A
PsiT1 c.1714A>G p.Asn572Asp missense variant moderate CM039007.1 1665658

IGV: Start, Jump

A/G
PsiT1 c.1720+1G>T splice donor variant & intron variant high CM039007.1 1665665

IGV: Start, Jump

G/T
PsiT1 c.1735G>A p.Val579Ile missense variant moderate CM039007.1 1666040

IGV: Start, Jump

G/A
PsiT1 c.1736T>C p.Val579Ala missense variant moderate CM039007.1 1666041

IGV: Start, Jump

T/C
PsiT1 c.2038T>G p.Ser680Ala missense variant moderate CM039007.1 1666406

IGV: Start, Jump

T/G
PsiT1 c.2065T>G p.Leu689Val missense variant moderate CM039007.1 1666433

IGV: Start, Jump

T/G
PsiT1 c.2237A>G p.Glu746Gly missense variant moderate CM039007.1 1666605

IGV: Start, Jump

A/G
PsiT1 c.2254A>G p.Arg752Gly missense variant moderate CM039007.1 1666622

IGV: Start, Jump

A/G
PsiT1 c.2573A>T p.Gln858Leu missense variant moderate CM039007.1 1666941

IGV: Start, Jump

A/T
PsiH c.708G>T p.Lys236Asn missense variant moderate CM039007.1 1668429

IGV: Start, Jump

G/T
PsiM c.305G>A p.Arg102Lys missense variant moderate CM039007.1 1674573

IGV: Start, Jump

C/T
PsiM c.225-2A>T splice acceptor variant & intron variant high CM039007.1 1674655

IGV: Start, Jump

T/A
PsiD c.66G>T p.Leu22Phe missense variant moderate CM039007.1 1677485

IGV: Start, Jump

C/A
Fvcpc2 c.601T>C p.Ser201Pro missense variant moderate CM038999.1 1973492

IGV: Start, Jump

T/C

Nearest genetic relatives (All Samples)

0 0.083 0.167 0.250 0.333
  1. 0.128 Costa-Rica-2-redo-SW (PSP10023)
  2. 0.134 Costa-Rica-1-redo-SW (PSP10022)
  3. 0.202 Costa-Rica-1-redo-SW (PSP10003)
  4. 0.210 Costa-Rica-2-redo-SW (PSP10004)
  5. 0.296 Penvy-2-SW (PSP10075)
  6. 0.296 Penvy-Col5-PS (PSP10044)
  7. 0.296 Penvy-1-PS (PSP10045)
  8. 0.296 Penvy-Col4-PS (PSP10043)
  9. 0.310 Roatan-Honduras-4-Mush (PSP10079)
  10. 0.314 Arenal-Volcano-1-Mush (PSP10059)
  11. 0.316 Luminous-lucies-2-PS (PSP10032)
  12. 0.316 Luminous-lucies-3-PS (PSP10033)
  13. 0.316 Luminous-lucies-1-PS (PSP10034)
  14. 0.317 Treasure-coast-1-PS (PSP10054)
  15. 0.317 Treasure-coast-3-PS (PSP10056)
  16. 0.317 Treasure-Coast-2-Mush (PSP10082)
  17. 0.317 Treasure-coast-2-PS (PSP10055)
  18. 0.321 ColumbiaRust-1-SW (PSP10021)
  19. 0.328 Bplus-ITW-WM (PSP10129)
  20. 0.331 Orissa-India-4-Mush (PSP10073)

Most genetically distant strains (All Samples)

0 0.167 0.333 0.500 0.667
  1. 0.639 Bplus-3-PS (PSP10001)
  2. 0.637 GoldenCoast-BAF-A1-UM (PSP10105)
  3. 0.636 GoldenCoast-BAF-B1-UM (PSP10107)
  4. 0.635 GoldenCoast-BAF-B2-UM (PSP10108)
  5. 0.635 GoldenCoast-BAF-A2-UM (PSP10106)
  6. 0.635 Puerto-Rican-ITW (PSP10078)
  7. 0.634 Orissa-India-ITW (PSP10071)
  8. 0.633 Bplus-2-redo-SW (PSP10015)
  9. 0.632 Huautla-3-PS (PSP10005)
  10. 0.632 Bplus-1-redo-SW (PSP10014)
  11. 0.632 Bplus-3-redo-SW (PSP10016)
  12. 0.631 Maui-2-PS (PSP10041)
  13. 0.631 Huautla-3-redo-SW (PSP10031)
  14. 0.631 Huautla-2-redo-SW (PSP10030)
  15. 0.631 Ecuador-3-SW (PSP10025)
  16. 0.631 GoldenTeacher-3-SW (PSP10029)
  17. 0.630 McKennaii-1-PS (PSP10069)
  18. 0.630 Maui-3-PS (PSP10042)
  19. 0.630 True-Albino-Teacher-ITW-WM (PSP10140)
  20. 0.630 Maui-1-PS (PSP10040)

Blockchain Registration Information

Transaction ID
8c50e820eef1c5e91e17155e896dc6f9265bce833f924b443d238e95fad3096f
Stamping Certificate
Download PDF (39.6 KB)
SHASUM Hash
b6d4497f3c8e7e714c77dd267d999a13dfb7999a15e42678dc5966a05392361c
QR code for PSP10024

Psilocydia uses cookies

By clicking Allow All, you agree to the storing of cookies on your device to enhance site navigation, analyze site usage, and assist in our marketing efforts.

Customize Settings