GoldenTeacher-2-SW

PSP 10028

DNA Source: SporeWorks

General Information

Accession Date
May 11, 2021
Report Type
Whole-Genome Sequencing
DNA Source Website
sporeworks.com

Genetic Information

These charts represent the Illumina sequence coverage over the Psilocybin synthase genes.

Psilocybin Synthase Gene Coverage

Learn more about read coverage plots.

Read Coverage
No. of Contigs (>= 25K bp)
436
No. of Contigs (>= 50K bp)
203
Total Length (>= 25K bp)
28,851,112
Total Length (>= 50K bp)
20,702,743
Total Contigs
2,872
Largest Contig
388,781
Total Length
40,015,197
GC (%)
46.14
N50
52,001

Learn more about blob plots.

Blob Plot

Variants

PsiR c.694G>A p.Glu232Lys missense variant moderate CM039007.1 1656080

IGV: Start, Jump

C/T
PsiT1 c.362A>G p.Glu121Gly missense variant & splice region variant moderate CM039007.1 1663786

IGV: Start, Jump

A/G
PsiT1 c.640A>C p.Ile214Leu missense variant moderate CM039007.1 1664184

IGV: Start, Jump

A/C
PsiT1 c.1735G>A p.Val579Ile missense variant moderate CM039007.1 1666040

IGV: Start, Jump

G/A
PsiT1 c.1736T>C p.Val579Ala missense variant moderate CM039007.1 1666041

IGV: Start, Jump

T/C
PsiT1 c.2254A>G p.Arg752Gly missense variant moderate CM039007.1 1666622

IGV: Start, Jump

A/G
PsiH c.20C>T p.Ser7Phe missense variant moderate CM039007.1 1667530

IGV: Start, Jump

C/T
PsiM c.305G>A p.Arg102Lys missense variant moderate CM039007.1 1674573

IGV: Start, Jump

C/T
PsiD c.617G>A p.Gly206Asp missense variant moderate CM039007.1 1676885

IGV: Start, Jump

C/T
PsiD c.616G>A p.Gly206Ser missense variant moderate CM039007.1 1676886

IGV: Start, Jump

C/T
PsiD c.66G>T p.Leu22Phe missense variant moderate CM039007.1 1677485

IGV: Start, Jump

C/A

Nearest genetic relatives (All Samples)

0 0.033 0.067 0.100 0.133
  1. 0.031 GoldenTeacher-3-SW (PSP10029)
  2. 0.032 Ecuador-3-SW (PSP10025)
  3. 0.033 Maui-2-PS (PSP10041)
  4. 0.035 Maui-1-PS (PSP10040)
  5. 0.035 Maui-3-PS (PSP10042)
  6. 0.038 Ecuador-3-PS (PSP10061)
  7. 0.039 GoldenTeacher-1-SW (PSP10027)
  8. 0.039 Golden-Teacher (PSP10089)
  9. 0.040 Bplus-2-redo-SW (PSP10015)
  10. 0.042 Bplus-1-redo-SW (PSP10014)
  11. 0.042 Bplus-3-redo-SW (PSP10016)
  12. 0.042 Huautla-3-PS (PSP10005)
  13. 0.043 Huautla-3-redo-SW (PSP10031)
  14. 0.045 Z-strain-3-PS (PSP10084)
  15. 0.045 Huautla-2-redo-SW (PSP10030)
  16. 0.045 PES-2-SW (PSP10008)
  17. 0.053 GoldenCoast-BAF-A2-UM (PSP10106)
  18. 0.054 Bplus-3-PS (PSP10001)
  19. 0.054 Orissa-India-ITW (PSP10071)
  20. 0.055 GoldenCoast-BAF-B1-UM (PSP10107)

Most genetically distant strains (All Samples)

0 0.183 0.367 0.550 0.733
  1. 0.717 Penvy-1-PS (PSP10045)
  2. 0.717 Penvy-Col5-PS (PSP10044)
  3. 0.717 Penvy-Col4-PS (PSP10043)
  4. 0.716 Penvy-2-SW (PSP10075)
  5. 0.662 Costa-Rica-1-redo-SW (PSP10022)
  6. 0.659 Costa-Rica-2-redo-SW (PSP10023)
  7. 0.649 Treasure-coast-1-PS (PSP10054)
  8. 0.648 Treasure-coast-2-PS (PSP10055)
  9. 0.648 Treasure-coast-3-PS (PSP10056)
  10. 0.647 Treasure-Coast-2-Mush (PSP10082)
  11. 0.629 Costa-Rica-3-redo-SW (PSP10024)
  12. 0.615 Bplus-ITW-WM (PSP10129)
  13. 0.608 Orissa-India-1-Mush (PSP10072)
  14. 0.606 Arenal-Volcano-1-Mush (PSP10059)
  15. 0.603 Orissa-India-4-Mush (PSP10073)
  16. 0.602 Luminous-lucies-2-PS (PSP10032)
  17. 0.601 Luminous-lucies-3-PS (PSP10033)
  18. 0.601 Luminous-lucies-1-PS (PSP10034)
  19. 0.600 ColumbiaRust-1-SW (PSP10021)
  20. 0.600 Roatan-Honduras-4-Mush (PSP10079)

Blockchain Registration Information

Transaction ID
9eb021896e58954788b96eb8fd92926e5cdd7908c4d46feaf378f602d7a13bf8
Stamping Certificate
Download PDF (39.6 KB)
SHASUM Hash
47a5139bf0d6b13d0129817803ff24ff0a9dd937528e01e16e76f15174bf80e5
QR code for PSP10028

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