GoldenTeacher-3-SW

PSP 10029

DNA Source: SporeWorks

General Information

Accession Date
May 11, 2021
Report Type
Whole-Genome Sequencing
DNA Source Website
sporeworks.com

Genetic Information

These charts represent the Illumina sequence coverage over the Psilocybin synthase genes.

Psilocybin Synthase Gene Coverage

Learn more about read coverage plots.

Read Coverage
No. of Contigs (>= 25K bp)
406
No. of Contigs (>= 50K bp)
207
Total Length (>= 25K bp)
29,861,146
Total Length (>= 50K bp)
22,744,406
Total Contigs
2,646
Largest Contig
476,402
Total Length
40,049,736
GC (%)
46.15
N50
62,965

Learn more about blob plots.

Blob Plot

Variants

PsiT1 c.362A>G p.Glu121Gly missense variant & splice region variant moderate CM039007.1 1663786

IGV: Start, Jump

A/G
PsiT1 c.640A>C p.Ile214Leu missense variant moderate CM039007.1 1664184

IGV: Start, Jump

A/C
PsiT1 c.1735G>A p.Val579Ile missense variant moderate CM039007.1 1666040

IGV: Start, Jump

G/A
PsiT1 c.1736T>C p.Val579Ala missense variant moderate CM039007.1 1666041

IGV: Start, Jump

T/C
PsiT1 c.2254A>G p.Arg752Gly missense variant moderate CM039007.1 1666622

IGV: Start, Jump

A/G
PsiH c.20C>T p.Ser7Phe missense variant moderate CM039007.1 1667530

IGV: Start, Jump

C/T
PsiM c.305G>A p.Arg102Lys missense variant moderate CM039007.1 1674573

IGV: Start, Jump

C/T
PsiD c.617G>A p.Gly206Asp missense variant moderate CM039007.1 1676885

IGV: Start, Jump

C/T
PsiD c.616G>A p.Gly206Ser missense variant moderate CM039007.1 1676886

IGV: Start, Jump

C/T
PsiD c.66G>T p.Leu22Phe missense variant moderate CM039007.1 1677485

IGV: Start, Jump

C/A

Nearest genetic relatives (All Samples)

0 0.033 0.067 0.100 0.133
  1. 0.026 Maui-2-PS (PSP10041)
  2. 0.026 Ecuador-3-SW (PSP10025)
  3. 0.029 Maui-1-PS (PSP10040)
  4. 0.029 Maui-3-PS (PSP10042)
  5. 0.030 Ecuador-3-PS (PSP10061)
  6. 0.031 Golden-Teacher (PSP10089)
  7. 0.031 GoldenTeacher-2-SW (PSP10028)
  8. 0.033 GoldenTeacher-1-SW (PSP10027)
  9. 0.034 Bplus-2-redo-SW (PSP10015)
  10. 0.034 Huautla-3-PS (PSP10005)
  11. 0.035 Bplus-1-redo-SW (PSP10014)
  12. 0.036 Bplus-3-redo-SW (PSP10016)
  13. 0.036 Huautla-3-redo-SW (PSP10031)
  14. 0.037 Z-strain-3-PS (PSP10084)
  15. 0.038 PES-2-SW (PSP10008)
  16. 0.039 Huautla-2-redo-SW (PSP10030)
  17. 0.046 GoldenCoast-BAF-A2-UM (PSP10106)
  18. 0.047 Orissa-India-ITW (PSP10071)
  19. 0.047 GoldenCoast-BAF-B1-UM (PSP10107)
  20. 0.047 GoldenCoast-BAF-A1-UM (PSP10105)

Most genetically distant strains (All Samples)

0 0.183 0.367 0.550 0.733
  1. 0.721 Penvy-1-PS (PSP10045)
  2. 0.721 Penvy-Col5-PS (PSP10044)
  3. 0.721 Penvy-Col4-PS (PSP10043)
  4. 0.720 Penvy-2-SW (PSP10075)
  5. 0.665 Costa-Rica-1-redo-SW (PSP10022)
  6. 0.663 Costa-Rica-2-redo-SW (PSP10023)
  7. 0.651 Treasure-coast-2-PS (PSP10055)
  8. 0.650 Treasure-coast-1-PS (PSP10054)
  9. 0.650 Treasure-coast-3-PS (PSP10056)
  10. 0.649 Treasure-Coast-2-Mush (PSP10082)
  11. 0.631 Costa-Rica-3-redo-SW (PSP10024)
  12. 0.618 Bplus-ITW-WM (PSP10129)
  13. 0.610 Orissa-India-1-Mush (PSP10072)
  14. 0.607 Arenal-Volcano-1-Mush (PSP10059)
  15. 0.606 Orissa-India-4-Mush (PSP10073)
  16. 0.603 Luminous-lucies-2-PS (PSP10032)
  17. 0.602 ColumbiaRust-1-SW (PSP10021)
  18. 0.602 Luminous-lucies-3-PS (PSP10033)
  19. 0.602 Luminous-lucies-1-PS (PSP10034)
  20. 0.601 Roatan-Honduras-4-Mush (PSP10079)

Blockchain Registration Information

Transaction ID
5d51584de0fe0def78aea0a6d4c433db6c5b339f855450649bc67cdcc021f2fc
Stamping Certificate
Download PDF (39.7 KB)
SHASUM Hash
302ba3a8e323742fddef2a40a6b2a93c240ac049642c158e9ee1e22d39807762
QR code for PSP10029

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