Huautla-3-redo-SW

PSP 10031

DNA Source: SporeWorks

General Information

Accession Date
May 11, 2021
Report Type
Whole-Genome Sequencing
DNA Source Website
sporeworks.com

Genetic Information

These charts represent the Illumina sequence coverage over the Psilocybin synthase genes.

Psilocybin Synthase Gene Coverage

Learn more about read coverage plots.

Read Coverage
No. of Contigs (>= 25K bp)
413
No. of Contigs (>= 50K bp)
207
Total Length (>= 25K bp)
29,717,867
Total Length (>= 50K bp)
22,296,803
Total Contigs
3,567
Largest Contig
365,511
Total Length
40,739,035
GC (%)
46.12
N50
60,365

Learn more about blob plots.

Blob Plot

Variants

PsiT1 c.362A>G p.Glu121Gly missense variant & splice region variant moderate CM039007.1 1663786

IGV: Start, Jump

A/G
PsiT1 c.640A>C p.Ile214Leu missense variant moderate CM039007.1 1664184

IGV: Start, Jump

A/C
PsiT1 c.1735G>A p.Val579Ile missense variant moderate CM039007.1 1666040

IGV: Start, Jump

G/A
PsiT1 c.1736T>C p.Val579Ala missense variant moderate CM039007.1 1666041

IGV: Start, Jump

T/C
PsiT1 c.2254A>G p.Arg752Gly missense variant moderate CM039007.1 1666622

IGV: Start, Jump

A/G
PsiH c.20C>T p.Ser7Phe missense variant moderate CM039007.1 1667530

IGV: Start, Jump

C/T
PsiM c.305G>A p.Arg102Lys missense variant moderate CM039007.1 1674573

IGV: Start, Jump

C/T
PsiD c.617G>A p.Gly206Asp missense variant moderate CM039007.1 1676885

IGV: Start, Jump

C/T
PsiD c.616G>A p.Gly206Ser missense variant moderate CM039007.1 1676886

IGV: Start, Jump

C/T
PsiD c.66G>T p.Leu22Phe missense variant moderate CM039007.1 1677485

IGV: Start, Jump

C/A

Nearest genetic relatives (All Samples)

0 0.033 0.067 0.100 0.133
  1. 0.020 Huautla-3-PS (PSP10005)
  2. 0.025 Huautla-2-redo-SW (PSP10030)
  3. 0.030 Maui-2-PS (PSP10041)
  4. 0.032 Maui-3-PS (PSP10042)
  5. 0.033 Maui-1-PS (PSP10040)
  6. 0.035 Golden-Teacher (PSP10089)
  7. 0.036 GoldenTeacher-3-SW (PSP10029)
  8. 0.037 Bplus-2-redo-SW (PSP10015)
  9. 0.038 Ecuador-3-SW (PSP10025)
  10. 0.039 Bplus-3-redo-SW (PSP10016)
  11. 0.039 Bplus-1-redo-SW (PSP10014)
  12. 0.039 Ecuador-3-PS (PSP10061)
  13. 0.040 Z-strain-3-PS (PSP10084)
  14. 0.042 PES-2-SW (PSP10008)
  15. 0.043 GoldenTeacher-2-SW (PSP10028)
  16. 0.044 GoldenTeacher-1-SW (PSP10027)
  17. 0.047 Puerto-Rican-ITW (PSP10078)
  18. 0.048 Bplus-3-PS (PSP10001)
  19. 0.050 GoldenCoast-BAF-A2-UM (PSP10106)
  20. 0.050 GoldenCoast-BAF-B1-UM (PSP10107)

Most genetically distant strains (All Samples)

0 0.183 0.367 0.550 0.733
  1. 0.721 Penvy-1-PS (PSP10045)
  2. 0.721 Penvy-Col5-PS (PSP10044)
  3. 0.721 Penvy-Col4-PS (PSP10043)
  4. 0.720 Penvy-2-SW (PSP10075)
  5. 0.667 Costa-Rica-1-redo-SW (PSP10022)
  6. 0.662 Costa-Rica-2-redo-SW (PSP10023)
  7. 0.648 Treasure-coast-1-PS (PSP10054)
  8. 0.647 Treasure-coast-2-PS (PSP10055)
  9. 0.647 Treasure-coast-3-PS (PSP10056)
  10. 0.646 Treasure-Coast-2-Mush (PSP10082)
  11. 0.631 Costa-Rica-3-redo-SW (PSP10024)
  12. 0.616 Orissa-India-1-Mush (PSP10072)
  13. 0.615 Bplus-ITW-WM (PSP10129)
  14. 0.609 Orissa-India-4-Mush (PSP10073)
  15. 0.607 Arenal-Volcano-1-Mush (PSP10059)
  16. 0.605 ColumbiaRust-1-SW (PSP10021)
  17. 0.602 Luminous-lucies-2-PS (PSP10032)
  18. 0.602 Luminous-lucies-3-PS (PSP10033)
  19. 0.602 Luminous-lucies-1-PS (PSP10034)
  20. 0.601 Roatan-Honduras-4-Mush (PSP10079)

Blockchain Registration Information

Transaction ID
3d0647b3ae96804b862e0c75379ee0c6e5d2e61fc850d4f88c411ab8421e8ad8
Stamping Certificate
Download PDF (39.5 KB)
SHASUM Hash
539ef905b0d675001b81b515b44f9800a031ecb0252b81f29078cd071aa03f6a
QR code for PSP10031

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