Malabar-2-SW

PSP 10035

DNA Source: SporeWorks

General Information

Accession Date
May 11, 2021
Report Type
Whole-Genome Sequencing
DNA Source Website
sporeworks.com

Genetic Information

These charts represent the Illumina sequence coverage over the Psilocybin synthase genes.

Psilocybin Synthase Gene Coverage

Learn more about read coverage plots.

Read Coverage
No. of Contigs (>= 25K bp)
398
No. of Contigs (>= 50K bp)
185
Total Length (>= 25K bp)
28,925,692
Total Length (>= 50K bp)
21,475,943
Total Contigs
4,021
Largest Contig
660,791
Total Length
41,393,811
GC (%)
46.14
N50
53,537

Learn more about blob plots.

Blob Plot

Variants

PsiT1 c.362A>G p.Glu121Gly missense variant & splice region variant moderate CM039007.1 1663786

IGV: Start, Jump

A/G
PsiT1 c.640A>C p.Ile214Leu missense variant moderate CM039007.1 1664184

IGV: Start, Jump

A/C
PsiT1 c.1735G>A p.Val579Ile missense variant moderate CM039007.1 1666040

IGV: Start, Jump

G/A
PsiT1 c.1736T>C p.Val579Ala missense variant moderate CM039007.1 1666041

IGV: Start, Jump

T/C
PsiT1 c.2254A>G p.Arg752Gly missense variant moderate CM039007.1 1666622

IGV: Start, Jump

A/G
PsiH c.20C>T p.Ser7Phe missense variant moderate CM039007.1 1667530

IGV: Start, Jump

C/T
PsiM c.305G>A p.Arg102Lys missense variant moderate CM039007.1 1674573

IGV: Start, Jump

C/T
PsiD c.617G>A p.Gly206Asp missense variant moderate CM039007.1 1676885

IGV: Start, Jump

C/T
PsiD c.616G>A p.Gly206Ser missense variant moderate CM039007.1 1676886

IGV: Start, Jump

C/T
PsiD c.66G>T p.Leu22Phe missense variant moderate CM039007.1 1677485

IGV: Start, Jump

C/A

Nearest genetic relatives (All Samples)

0 0.108 0.217 0.325 0.433
  1. 0.015 Malabar-1-PS (PSP10037)
  2. 0.015 Malabar-2-PS (PSP10038)
  3. 0.015 Malabar-3-PS (PSP10039)
  4. 0.016 Malabar-3-SW (PSP10036)
  5. 0.050 Mazatapec-2-SW (PSP10006)
  6. 0.063 Mazatapec-cube-1-Mush (PSP10068)
  7. 0.274 WFB-UM-WM (PSP10121)
  8. 0.274 WFB-UM (PSP10112)
  9. 0.322 BM1b-UM-WM (PSP10125)
  10. 0.324 Mazatapec (PSP10093)
  11. 0.347 BM1-UM (PSP10098)
  12. 0.358 BM16 (PSP10087)
  13. 0.381 Samui-2-PS (PSP10048)
  14. 0.392 Orissa-India-print-ITW (PSP10074)
  15. 0.404 GoldenTeacher-1-SW (PSP10027)
  16. 0.407 PES-2-SW (PSP10008)
  17. 0.408 KOH-Samui-1-ITW (PSP10063)
  18. 0.408 Thailand-Koh-Samui-1-Mush (PSP10080)
  19. 0.409 Maui-2-PS (PSP10041)
  20. 0.410 Ecuador-3-PS (PSP10061)

Most genetically distant strains (All Samples)

0 0.133 0.267 0.400 0.533
  1. 0.508 Albino-Aplus-1-SW (PSP10013)
  2. 0.502 Penvy-1-PS (PSP10045)
  3. 0.502 Penvy-Col5-PS (PSP10044)
  4. 0.502 Penvy-Col4-PS (PSP10043)
  5. 0.502 Aplusplus (PSP10085)
  6. 0.501 Penvy-2-SW (PSP10075)
  7. 0.495 Panaeolus-Copelandia-Tropicalis-2-Mush (PSP10077)
  8. 0.493 Costa-Rica-1-redo-SW (PSP10022)
  9. 0.487 AAplus-4-Mush (PSP10057)
  10. 0.487 Costa-Rica-2-redo-SW (PSP10023)
  11. 0.487 Albino-Aplus-3-PS (PSP10000)
  12. 0.486 Orissa-India-1-Mush (PSP10072)
  13. 0.486 Leucistic GT2-ITW (PSP10067)
  14. 0.477 Escondido-Mexico-1-Mush (PSP10062)
  15. 0.473 Leucistic GT1-ITW (PSP10066)
  16. 0.466 Costa-Rica-3-redo-SW (PSP10024)
  17. 0.465 Amazon-ITW-WM (PSP10122)
  18. 0.463 Costa-Rica-1-redo-SW (PSP10003)
  19. 0.463 Orissa-India-4-Mush (PSP10073)
  20. 0.462 APlusPlus-Leucistic-ITW (PSP10058)

Blockchain Registration Information

Transaction ID
c7392f54181cd29138ec45eba4abb43f94c0bc805c1af7889b36d1fe22818df0
Stamping Certificate
Download PDF (39.7 KB)
SHASUM Hash
53458c4fe9516ee2a914c3b754984f9259a6d229d6ea4dbdad4b7e55894ee574
QR code for PSP10035

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