Malabar-1-PS

PSP 10037

DNA Source: Premium Spores

General Information

Accession Date
May 11, 2021
Report Type
Whole-Genome Sequencing
DNA Source Website
premiumspores.com

Genetic Information

These charts represent the Illumina sequence coverage over the Psilocybin synthase genes.

Psilocybin Synthase Gene Coverage

Learn more about read coverage plots.

Read Coverage
No. of Contigs (>= 25K bp)
402
No. of Contigs (>= 50K bp)
191
Total Length (>= 25K bp)
29,054,356
Total Length (>= 50K bp)
21,656,545
Total Contigs
3,806
Largest Contig
476,407
Total Length
41,258,174
GC (%)
46.14
N50
55,141

Learn more about blob plots.

Blob Plot

Variants

PsiT1 c.362A>G p.Glu121Gly missense variant & splice region variant moderate CM039007.1 1663786

IGV: Start, Jump

A/G
PsiT1 c.640A>C p.Ile214Leu missense variant moderate CM039007.1 1664184

IGV: Start, Jump

A/C
PsiT1 c.1735G>A p.Val579Ile missense variant moderate CM039007.1 1666040

IGV: Start, Jump

G/A
PsiT1 c.1736T>C p.Val579Ala missense variant moderate CM039007.1 1666041

IGV: Start, Jump

T/C
PsiT1 c.2254A>G p.Arg752Gly missense variant moderate CM039007.1 1666622

IGV: Start, Jump

A/G
PsiH c.20C>T p.Ser7Phe missense variant moderate CM039007.1 1667530

IGV: Start, Jump

C/T
PsiM c.305G>A p.Arg102Lys missense variant moderate CM039007.1 1674573

IGV: Start, Jump

C/T
PsiD c.617G>A p.Gly206Asp missense variant moderate CM039007.1 1676885

IGV: Start, Jump

C/T
PsiD c.616G>A p.Gly206Ser missense variant moderate CM039007.1 1676886

IGV: Start, Jump

C/T
PsiD c.66G>T p.Leu22Phe missense variant moderate CM039007.1 1677485

IGV: Start, Jump

C/A

Nearest genetic relatives (All Samples)

0 0.108 0.217 0.325 0.433
  1. 0.015 Malabar-3-PS (PSP10039)
  2. 0.015 Malabar-2-PS (PSP10038)
  3. 0.015 Malabar-2-SW (PSP10035)
  4. 0.016 Malabar-3-SW (PSP10036)
  5. 0.049 Mazatapec-2-SW (PSP10006)
  6. 0.063 Mazatapec-cube-1-Mush (PSP10068)
  7. 0.274 WFB-UM-WM (PSP10121)
  8. 0.274 WFB-UM (PSP10112)
  9. 0.322 BM1b-UM-WM (PSP10125)
  10. 0.324 Mazatapec (PSP10093)
  11. 0.347 BM1-UM (PSP10098)
  12. 0.358 BM16 (PSP10087)
  13. 0.381 Samui-2-PS (PSP10048)
  14. 0.392 Orissa-India-print-ITW (PSP10074)
  15. 0.404 GoldenTeacher-1-SW (PSP10027)
  16. 0.406 PES-2-SW (PSP10008)
  17. 0.408 KOH-Samui-1-ITW (PSP10063)
  18. 0.408 Thailand-Koh-Samui-1-Mush (PSP10080)
  19. 0.409 Maui-2-PS (PSP10041)
  20. 0.409 Ecuador-3-PS (PSP10061)

Most genetically distant strains (All Samples)

0 0.133 0.267 0.400 0.533
  1. 0.508 Albino-Aplus-1-SW (PSP10013)
  2. 0.503 Penvy-Col5-PS (PSP10044)
  3. 0.503 Penvy-1-PS (PSP10045)
  4. 0.502 Penvy-Col4-PS (PSP10043)
  5. 0.502 Penvy-2-SW (PSP10075)
  6. 0.502 Aplusplus (PSP10085)
  7. 0.495 Panaeolus-Copelandia-Tropicalis-2-Mush (PSP10077)
  8. 0.494 Costa-Rica-1-redo-SW (PSP10022)
  9. 0.487 Costa-Rica-2-redo-SW (PSP10023)
  10. 0.487 AAplus-4-Mush (PSP10057)
  11. 0.486 Leucistic GT2-ITW (PSP10067)
  12. 0.486 Albino-Aplus-3-PS (PSP10000)
  13. 0.486 Orissa-India-1-Mush (PSP10072)
  14. 0.477 Escondido-Mexico-1-Mush (PSP10062)
  15. 0.473 Leucistic GT1-ITW (PSP10066)
  16. 0.466 Costa-Rica-3-redo-SW (PSP10024)
  17. 0.465 Amazon-ITW-WM (PSP10122)
  18. 0.464 Costa-Rica-1-redo-SW (PSP10003)
  19. 0.463 APlusPlus-Leucistic-ITW (PSP10058)
  20. 0.462 Orissa-India-4-Mush (PSP10073)

Blockchain Registration Information

Transaction ID
07c456a5bb6a7b4ff7c4a2a1104afdfbf99aa0e417b525e46b879a4d5076c2d8
Stamping Certificate
Download PDF (39.4 KB)
SHASUM Hash
6fbf9e71320134b628c026628c5262bb3171bfcb4bcd2320d341c7206cb8475f
QR code for PSP10037

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