KOH-Samui-2-ITW

PSP 10064

DNA Source: Inoculate the World

General Information

Accession Date
June 13, 2021
Report Type
Whole-Genome Sequencing
DNA Source Website
inoculatetheworld.com

Genetic Information

These charts represent the Illumina sequence coverage over the Psilocybin synthase genes.

Psilocybin Synthase Gene Coverage

Learn more about read coverage plots.

Read Coverage
No. of Contigs (>= 25K bp)
386
No. of Contigs (>= 50K bp)
207
Total Length (>= 25K bp)
30,132,082
Total Length (>= 50K bp)
23,771,428
Total Contigs
3,202
Largest Contig
615,487
Total Length
40,365,241
GC (%)
46.1
N50
64,739

Learn more about blob plots.

Blob Plot

Variants

PsiT1 c.362A>G p.Glu121Gly missense variant & splice region variant moderate CM039007.1 1663786

IGV: Start, Jump

A/G
PsiT1 c.640A>C p.Ile214Leu missense variant moderate CM039007.1 1664184

IGV: Start, Jump

A/C
PsiT1 c.737C>T p.Thr246Ile missense variant moderate CM039007.1 1664333

IGV: Start, Jump

C/T
PsiT1 c.798A>T p.Arg266Ser missense variant moderate CM039007.1 1664394

IGV: Start, Jump

A/T
PsiT1 c.1156A>G p.Thr386Ala missense variant moderate CM039007.1 1664803

IGV: Start, Jump

A/G
PsiT1 c.1513A>G p.Ile505Val missense variant moderate CM039007.1 1665277

IGV: Start, Jump

A/G
PsiT1 c.1616A>G p.His539Arg missense variant moderate CM039007.1 1665560

IGV: Start, Jump

A/G
PsiT1 c.1626G>A p.Met542Ile missense variant moderate CM039007.1 1665570

IGV: Start, Jump

G/A
PsiT1 c.1687A>C p.Ile563Leu missense variant moderate CM039007.1 1665631

IGV: Start, Jump

A/C
PsiT1 c.1690G>A p.Val564Ile missense variant moderate CM039007.1 1665634

IGV: Start, Jump

G/A
PsiT1 c.1714A>G p.Asn572Asp missense variant moderate CM039007.1 1665658

IGV: Start, Jump

A/G
PsiT1 c.1720+1G>T splice donor variant & intron variant high CM039007.1 1665665

IGV: Start, Jump

G/T
PsiT1 c.1735G>A p.Val579Ile missense variant moderate CM039007.1 1666040

IGV: Start, Jump

G/A
PsiT1 c.1736T>C p.Val579Ala missense variant moderate CM039007.1 1666041

IGV: Start, Jump

T/C
PsiT1 c.2038T>G p.Ser680Ala missense variant moderate CM039007.1 1666406

IGV: Start, Jump

T/G
PsiT1 c.2065T>G p.Leu689Val missense variant moderate CM039007.1 1666433

IGV: Start, Jump

T/G
PsiT1 c.2237A>G p.Glu746Gly missense variant moderate CM039007.1 1666605

IGV: Start, Jump

A/G
PsiT1 c.2254A>G p.Arg752Gly missense variant moderate CM039007.1 1666622

IGV: Start, Jump

A/G
PsiT1 c.2573A>T p.Gln858Leu missense variant moderate CM039007.1 1666941

IGV: Start, Jump

A/T

Nearest genetic relatives (All Samples)

0 0.075 0.150 0.225 0.300
  1. 0.230 Samui-2-PS (PSP10048)
  2. 0.268 KOH-Samui-1-ITW (PSP10063)
  3. 0.270 Huautla-3-PS (PSP10005)
  4. 0.270 Puerto-Rican-ITW (PSP10078)
  5. 0.272 Huautla-3-redo-SW (PSP10031)
  6. 0.273 Cambodian--1-PS (PSP10060)
  7. 0.274 Maui-2-PS (PSP10041)
  8. 0.274 Huautla-2-redo-SW (PSP10030)
  9. 0.275 Bplus-2-redo-SW (PSP10015)
  10. 0.275 Maui-3-PS (PSP10042)
  11. 0.275 Z-strain-3-PS (PSP10084)
  12. 0.275 PES-2-SW (PSP10008)
  13. 0.275 Maui-1-PS (PSP10040)
  14. 0.276 True-Albino-Teacher-ITW-WM (PSP10140)
  15. 0.276 Bplus-1-redo-SW (PSP10014)
  16. 0.276 Orissa-India-print-ITW (PSP10074)
  17. 0.277 Bplus-3-redo-SW (PSP10016)
  18. 0.277 Orissa-India-ITW (PSP10071)
  19. 0.277 Ecuador-3-PS (PSP10061)
  20. 0.277 McKennaii-1-PS (PSP10069)

Most genetically distant strains (All Samples)

0 0.150 0.300 0.450 0.600
  1. 0.571 Penvy-1-PS (PSP10045)
  2. 0.571 Penvy-Col5-PS (PSP10044)
  3. 0.571 Penvy-Col4-PS (PSP10043)
  4. 0.570 Penvy-2-SW (PSP10075)
  5. 0.538 Costa-Rica-1-redo-SW (PSP10022)
  6. 0.536 Costa-Rica-2-redo-SW (PSP10023)
  7. 0.535 Treasure-coast-1-PS (PSP10054)
  8. 0.535 Treasure-coast-3-PS (PSP10056)
  9. 0.534 Treasure-coast-2-PS (PSP10055)
  10. 0.533 Treasure-Coast-2-Mush (PSP10082)
  11. 0.511 Costa-Rica-3-redo-SW (PSP10024)
  12. 0.507 Bplus-ITW-WM (PSP10129)
  13. 0.498 ColumbiaRust-1-SW (PSP10021)
  14. 0.496 Roatan-Honduras-4-Mush (PSP10079)
  15. 0.495 Arenal-Volcano-1-Mush (PSP10059)
  16. 0.494 Luminous-lucies-2-PS (PSP10032)
  17. 0.493 Luminous-lucies-1-PS (PSP10034)
  18. 0.493 Luminous-lucies-3-PS (PSP10033)
  19. 0.489 Costa-Rica-1-redo-SW (PSP10003)
  20. 0.486 Guapile-ITW-col-WM (PSP10132)

Blockchain Registration Information

Transaction ID
c6e49fe7cddcb7d0d487298ff7d230e5ec40cc2d15521379634d32d9b7485d38
Stamping Certificate
Download PDF (39.8 KB)
SHASUM Hash
d7d1d436b5d36006b482f26c44c8d07441d9ccc1a7772bcee5ab879b7bb7b3c1
QR code for PSP10064

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