Mazatapec-cube-1-Mush

PSP 10068

DNA Source: Mushrooms.com

General Information

Accession Date
June 13, 2021
Report Type
Whole-Genome Sequencing
DNA Source Website
mushrooms.com

Genetic Information

These charts represent the Illumina sequence coverage over the Psilocybin synthase genes.

Psilocybin Synthase Gene Coverage

Learn more about read coverage plots.

Read Coverage
No. of Contigs (>= 25K bp)
407
No. of Contigs (>= 50K bp)
152
Total Length (>= 25K bp)
21,720,083
Total Length (>= 50K bp)
12,686,167
Total Contigs
5,844
Largest Contig
281,759
Total Length
41,987,424
GC (%)
46.12
N50
27,448

Learn more about blob plots.

Blob Plot

Variants

PsiT1 c.362A>G p.Glu121Gly missense variant & splice region variant moderate CM039007.1 1663786

IGV: Start, Jump

A/G
PsiT1 c.640A>C p.Ile214Leu missense variant moderate CM039007.1 1664184

IGV: Start, Jump

A/C
PsiT1 c.737C>T p.Thr246Ile missense variant moderate CM039007.1 1664333

IGV: Start, Jump

C/T
PsiT1 c.798A>T p.Arg266Ser missense variant moderate CM039007.1 1664394

IGV: Start, Jump

A/T
PsiT1 c.1065T>G p.Tyr355* stop gained high CM039007.1 1664712

IGV: Start, Jump

T/G
PsiT1 c.1156A>G p.Thr386Ala missense variant moderate CM039007.1 1664803

IGV: Start, Jump

A/G
PsiT1 c.1513A>G p.Ile505Val missense variant moderate CM039007.1 1665277

IGV: Start, Jump

A/G
PsiT1 c.1616A>G p.His539Arg missense variant moderate CM039007.1 1665560

IGV: Start, Jump

A/G
PsiT1 c.1626G>A p.Met542Ile missense variant moderate CM039007.1 1665570

IGV: Start, Jump

G/A
PsiT1 c.1687A>C p.Ile563Leu missense variant moderate CM039007.1 1665631

IGV: Start, Jump

A/C
PsiT1 c.1690G>A p.Val564Ile missense variant moderate CM039007.1 1665634

IGV: Start, Jump

G/A
PsiT1 c.1714A>G p.Asn572Asp missense variant moderate CM039007.1 1665658

IGV: Start, Jump

A/G
PsiT1 c.1720+1G>T splice donor variant & intron variant high CM039007.1 1665665

IGV: Start, Jump

G/T
PsiT1 c.1735G>A p.Val579Ile missense variant moderate CM039007.1 1666040

IGV: Start, Jump

G/A
PsiT1 c.1736T>C p.Val579Ala missense variant moderate CM039007.1 1666041

IGV: Start, Jump

T/C
PsiT1 c.2038T>G p.Ser680Ala missense variant moderate CM039007.1 1666406

IGV: Start, Jump

T/G
PsiT1 c.2065T>G p.Leu689Val missense variant moderate CM039007.1 1666433

IGV: Start, Jump

T/G
PsiT1 c.2237A>G p.Glu746Gly missense variant moderate CM039007.1 1666605

IGV: Start, Jump

A/G
PsiT1 c.2252C>A p.Ser751Tyr missense variant moderate CM039007.1 1666620

IGV: Start, Jump

C/A
PsiT1 c.2254A>G p.Arg752Gly missense variant moderate CM039007.1 1666622

IGV: Start, Jump

A/G
PsiT1 c.2573A>T p.Gln858Leu missense variant moderate CM039007.1 1666941

IGV: Start, Jump

A/T
PsiH c.20C>T p.Ser7Phe missense variant moderate CM039007.1 1667530

IGV: Start, Jump

C/T
PsiH c.708G>T p.Lys236Asn missense variant moderate CM039007.1 1668429

IGV: Start, Jump

G/T
PsiM c.305G>A p.Arg102Lys missense variant moderate CM039007.1 1674573

IGV: Start, Jump

C/T
PsiD c.617G>A p.Gly206Asp missense variant moderate CM039007.1 1676885

IGV: Start, Jump

C/T
PsiD c.616G>A p.Gly206Ser missense variant moderate CM039007.1 1676886

IGV: Start, Jump

C/T
PsiD c.66G>T p.Leu22Phe missense variant moderate CM039007.1 1677485

IGV: Start, Jump

C/A

Nearest genetic relatives (All Samples)

0 0.108 0.217 0.325 0.433
  1. 0.034 Mazatapec-2-SW (PSP10006)
  2. 0.062 Malabar-3-PS (PSP10039)
  3. 0.063 Malabar-1-PS (PSP10037)
  4. 0.063 Malabar-2-PS (PSP10038)
  5. 0.063 Malabar-3-SW (PSP10036)
  6. 0.063 Malabar-2-SW (PSP10035)
  7. 0.276 WFB-UM (PSP10112)
  8. 0.279 WFB-UM-WM (PSP10121)
  9. 0.319 Mazatapec (PSP10093)
  10. 0.331 BM1-UM (PSP10098)
  11. 0.337 BM1b-UM-WM (PSP10125)
  12. 0.339 BM16 (PSP10087)
  13. 0.379 Samui-2-PS (PSP10048)
  14. 0.387 Thailand-Koh-Samui-1-Mush (PSP10080)
  15. 0.388 Golden-Teacher Denver (PSP10011)
  16. 0.399 Orissa-India-print-ITW (PSP10074)
  17. 0.406 Roatan-Honduras-4-Mush (PSP10079)
  18. 0.409 KOH-Samui-1-ITW (PSP10063)
  19. 0.410 PES-2-SW (PSP10008)
  20. 0.410 GoldenTeacher-1-SW (PSP10027)

Most genetically distant strains (All Samples)

0 0.133 0.267 0.400 0.533
  1. 0.514 Albino-Aplus-1-SW (PSP10013)
  2. 0.504 Aplusplus (PSP10085)
  3. 0.496 Leucistic GT2-ITW (PSP10067)
  4. 0.495 Panaeolus-Copelandia-Tropicalis-2-Mush (PSP10077)
  5. 0.490 Albino-Aplus-3-PS (PSP10000)
  6. 0.490 AAplus-4-Mush (PSP10057)
  7. 0.482 Leucistic GT1-ITW (PSP10066)
  8. 0.482 Escondido-Mexico-1-Mush (PSP10062)
  9. 0.480 Penvy-1-PS (PSP10045)
  10. 0.480 Penvy-Col5-PS (PSP10044)
  11. 0.480 Penvy-Col4-PS (PSP10043)
  12. 0.479 Penvy-2-SW (PSP10075)
  13. 0.478 Amazon-ITW-WM (PSP10122)
  14. 0.477 Costa-Rica-1-redo-SW (PSP10022)
  15. 0.473 Costa-Rica-2-redo-SW (PSP10023)
  16. 0.463 BM2-UM-WM (PSP10126)
  17. 0.463 Blue-Meanie-ITW-WM (PSP10128)
  18. 0.460 APlusPlus-Leucistic-ITW (PSP10058)
  19. 0.460 Orissa-India-1-Mush (PSP10072)
  20. 0.457 Blue-Magnolia-Rust (PSP10086)

Blockchain Registration Information

Transaction ID
49a3b8809ad5a27e25d8e52addb443b7f9fcb78b821c51c3cc7f84ef58e24d43
Stamping Certificate
Download PDF (39.8 KB)
SHASUM Hash
b59944545677b293e8696c2401f37d698ceefcb6af9d4d452d5300c7476dd988
QR code for PSP10068

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