Puerto-Rican-ITW

PSP 10078

DNA Source: Inoculate the World

General Information

Accession Date
June 13, 2021
Report Type
Whole-Genome Sequencing

Genetic Information

These charts represent the Illumina sequence coverage over the Psilocybin synthase genes.

Psilocybin Synthase Gene Coverage

Learn more about read coverage plots.

Read Coverage
No. of Contigs (>= 25K bp)
498
No. of Contigs (>= 50K bp)
231
Total Length (>= 25K bp)
34,251,679
Total Length (>= 50K bp)
24,722,556
Total Contigs
2,882
Largest Contig
551,905
Total Length
45,892,051
GC (%)
49.03
N50
55,774

Learn more about blob plots.

Blob Plot

Variants

PsiT1 c.362A>G p.Glu121Gly missense variant & splice region variant moderate CM039007.1 1663786

IGV: Start, Jump

A/G
PsiT1 c.640A>C p.Ile214Leu missense variant moderate CM039007.1 1664184

IGV: Start, Jump

A/C
PsiT1 c.1735G>A p.Val579Ile missense variant moderate CM039007.1 1666040

IGV: Start, Jump

G/A
PsiT1 c.1736T>C p.Val579Ala missense variant moderate CM039007.1 1666041

IGV: Start, Jump

T/C
PsiT1 c.2254A>G p.Arg752Gly missense variant moderate CM039007.1 1666622

IGV: Start, Jump

A/G
PsiH c.20C>T p.Ser7Phe missense variant moderate CM039007.1 1667530

IGV: Start, Jump

C/T
PsiM c.305G>A p.Arg102Lys missense variant moderate CM039007.1 1674573

IGV: Start, Jump

C/T
PsiD c.617G>A p.Gly206Asp missense variant moderate CM039007.1 1676885

IGV: Start, Jump

C/T
PsiD c.616G>A p.Gly206Ser missense variant moderate CM039007.1 1676886

IGV: Start, Jump

C/T
PsiD c.66G>T p.Leu22Phe missense variant moderate CM039007.1 1677485

IGV: Start, Jump

C/A

Nearest genetic relatives (All Samples)

0 0.033 0.067 0.100 0.133
  1. 0.043 GoldenCoast-BAF-B2-UM (PSP10108)
  2. 0.043 Huautla-3-PS (PSP10005)
  3. 0.044 GoldenCoast-BAF-B1-UM (PSP10107)
  4. 0.045 Gulf-Coast (PSP10091)
  5. 0.046 Gulf-Coast-BAF (PSP10090)
  6. 0.047 Bplus-2-redo-SW (PSP10015)
  7. 0.047 Huautla-3-redo-SW (PSP10031)
  8. 0.047 Bplus-1-redo-SW (PSP10014)
  9. 0.048 Golden-Teacher (PSP10089)
  10. 0.048 Bplus-3-redo-SW (PSP10016)
  11. 0.050 Huautla-2-redo-SW (PSP10030)
  12. 0.050 Maui-2-PS (PSP10041)
  13. 0.050 Z-strain-3-PS (PSP10084)
  14. 0.052 Maui-1-PS (PSP10040)
  15. 0.053 Maui-3-PS (PSP10042)
  16. 0.053 GoldenCoast-BAF-A1-UM (PSP10105)
  17. 0.054 GoldenCoast-BAF-A2-UM (PSP10106)
  18. 0.054 Orissa-India-ITW (PSP10071)
  19. 0.055 GoldenTeacher-3-SW (PSP10029)
  20. 0.056 Ecuador-3-SW (PSP10025)

Most genetically distant strains (All Samples)

0 0.183 0.367 0.550 0.733
  1. 0.718 Penvy-1-PS (PSP10045)
  2. 0.717 Penvy-Col5-PS (PSP10044)
  3. 0.717 Penvy-Col4-PS (PSP10043)
  4. 0.716 Penvy-2-SW (PSP10075)
  5. 0.665 Costa-Rica-1-redo-SW (PSP10022)
  6. 0.664 Costa-Rica-2-redo-SW (PSP10023)
  7. 0.648 Treasure-coast-1-PS (PSP10054)
  8. 0.648 Treasure-coast-2-PS (PSP10055)
  9. 0.648 Treasure-coast-3-PS (PSP10056)
  10. 0.646 Treasure-Coast-2-Mush (PSP10082)
  11. 0.635 Costa-Rica-3-redo-SW (PSP10024)
  12. 0.614 Bplus-ITW-WM (PSP10129)
  13. 0.614 Orissa-India-1-Mush (PSP10072)
  14. 0.612 Arenal-Volcano-1-Mush (PSP10059)
  15. 0.611 ColumbiaRust-1-SW (PSP10021)
  16. 0.610 Orissa-India-4-Mush (PSP10073)
  17. 0.609 Luminous-lucies-2-PS (PSP10032)
  18. 0.608 Luminous-lucies-3-PS (PSP10033)
  19. 0.608 Luminous-lucies-1-PS (PSP10034)
  20. 0.605 Roatan-Honduras-4-Mush (PSP10079)

Blockchain Registration Information

Transaction ID
096f9f1fbba3a129abf905eafa5b8ef8457e220bc429d7eac96afa645e8271ab
Stamping Certificate
Download PDF (39.8 KB)
SHASUM Hash
d054fa8631e4f1686d7d8d977493514f4ce47a204bbc948fb1ecae97edafb614
QR code for PSP10078

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