Roatan-Honduras-4-Mush

PSP 10079

DNA Source: Mushrooms.com

General Information

Accession Date
June 13, 2021
Report Type
Whole-Genome Sequencing
DNA Source Website
mushrooms.com

Genetic Information

These charts represent the Illumina sequence coverage over the Psilocybin synthase genes.

Psilocybin Synthase Gene Coverage

Learn more about read coverage plots.

Read Coverage
No. of Contigs (>= 25K bp)
399
No. of Contigs (>= 50K bp)
179
Total Length (>= 25K bp)
25,827,341
Total Length (>= 50K bp)
18,018,963
Total Contigs
7,637
Largest Contig
554,928
Total Length
47,427,061
GC (%)
46.57
N50
30,655

Learn more about blob plots.

Blob Plot

Variants

PsiT1 c.362A>G p.Glu121Gly missense variant & splice region variant moderate CM039007.1 1663786

IGV: Start, Jump

A/G
PsiT1 c.496A>C p.Lys166Gln missense variant moderate CM039007.1 1663979

IGV: Start, Jump

A/C
PsiT1 c.640A>C p.Ile214Leu missense variant moderate CM039007.1 1664184

IGV: Start, Jump

A/C
PsiT1 c.1735G>A p.Val579Ile missense variant moderate CM039007.1 1666040

IGV: Start, Jump

G/A
PsiT1 c.1736T>C p.Val579Ala missense variant moderate CM039007.1 1666041

IGV: Start, Jump

T/C
PsiT1 c.2254A>G p.Arg752Gly missense variant moderate CM039007.1 1666622

IGV: Start, Jump

A/G
PsiM c.930G>T p.Ter310Tyrext*? stop lost & splice region variant high CM039007.1 1673493

IGV: Start, Jump

C/A
PsiM c.729G>A p.Trp243* stop gained high CM039007.1 1673826

IGV: Start, Jump

C/T
PsiM c.305G>A p.Arg102Lys missense variant moderate CM039007.1 1674573

IGV: Start, Jump

C/T
PsiM c.214G>C p.Val72Leu missense variant & splice region variant moderate CM039007.1 1674719

IGV: Start, Jump

C/G
PsiD c.66G>T p.Leu22Phe missense variant moderate CM039007.1 1677485

IGV: Start, Jump

C/A
PsiD c.5A>G p.Gln2Arg missense variant moderate CM039007.1 1677603

IGV: Start, Jump

T/C

Nearest genetic relatives (All Samples)

0 0.083 0.167 0.250 0.333
  1. 0.295 Arenal-Volcano-1-Mush (PSP10059)
  2. 0.295 Luminous-lucies-2-PS (PSP10032)
  3. 0.295 Luminous-lucies-1-PS (PSP10034)
  4. 0.295 Luminous-lucies-3-PS (PSP10033)
  5. 0.300 Orissa-India-4-Mush (PSP10073)
  6. 0.302 Treasure-Coast-2-Mush (PSP10082)
  7. 0.302 Treasure-coast-3-PS (PSP10056)
  8. 0.303 Treasure-coast-1-PS (PSP10054)
  9. 0.303 Treasure-coast-2-PS (PSP10055)
  10. 0.310 Costa-Rica-3-redo-SW (PSP10024)
  11. 0.314 ColumbiaRust-1-SW (PSP10021)
  12. 0.315 Bplus-ITW-WM (PSP10129)
  13. 0.321 Penvy-2-SW (PSP10075)
  14. 0.321 Penvy-1-PS (PSP10045)
  15. 0.321 Penvy-Col5-PS (PSP10044)
  16. 0.321 Penvy-Col4-PS (PSP10043)
  17. 0.322 Tosohatchee-print-ITW (PSP10081)
  18. 0.323 Costa-Rica-1-redo-SW (PSP10022)
  19. 0.323 MGC 2016 unknown strain (PSP10012)
  20. 0.325 Costa-Rica-2-redo-SW (PSP10023)

Most genetically distant strains (All Samples)

0 0.158 0.317 0.475 0.633
  1. 0.615 Bplus-3-PS (PSP10001)
  2. 0.612 GoldenCoast-BAF-A1-UM (PSP10105)
  3. 0.610 GoldenCoast-BAF-A2-UM (PSP10106)
  4. 0.608 Orissa-India-ITW (PSP10071)
  5. 0.607 Bplus (PSP10088)
  6. 0.607 GoldenCoast-BAF-B1-UM (PSP10107)
  7. 0.606 GoldenCoast-BAF-B2-UM (PSP10108)
  8. 0.606 HUA-Early (PSP10092)
  9. 0.605 Puerto-Rican-ITW (PSP10078)
  10. 0.605 McKennaii-1-PS (PSP10069)
  11. 0.604 Bplus-1-redo-SW (PSP10014)
  12. 0.604 Bplus-2-redo-SW (PSP10015)
  13. 0.604 True-Albino-Teacher-ITW-WM (PSP10140)
  14. 0.604 Gulf-Coast-BAF (PSP10090)
  15. 0.604 Bplus-3-redo-SW (PSP10016)
  16. 0.604 Gulf-Coast (PSP10091)
  17. 0.603 Huautla-2-redo-SW (PSP10030)
  18. 0.602 Ecuador-3-SW (PSP10025)
  19. 0.601 GoldenTeacher-3-SW (PSP10029)
  20. 0.601 Huautla-3-redo-SW (PSP10031)

Blockchain Registration Information

Transaction ID
3e2520137758c70ace7b378adbd2ae1b65b88a9734eb3207fb5fc73bf89d06cf
Stamping Certificate
Download PDF (39.4 KB)
SHASUM Hash
b895b87c0a8a9fe58782916f3ff063e4fd25b201769462270c717afa23f39e5c
QR code for PSP10079

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