Treasure-Coast-2-Mush

PSP 10082

DNA Source: Mushrooms.com

General Information

Accession Date
June 13, 2021
Report Type
Whole-Genome Sequencing
DNA Source Website
mushrooms.com

Genetic Information

These charts represent the Illumina sequence coverage over the Psilocybin synthase genes.

Psilocybin Synthase Gene Coverage

Learn more about read coverage plots.

Read Coverage
No. of Contigs (>= 25K bp)
406
No. of Contigs (>= 50K bp)
198
Total Length (>= 25K bp)
29,076,168
Total Length (>= 50K bp)
21,719,924
Total Contigs
3,718
Largest Contig
858,451
Total Length
40,787,192
GC (%)
46.08
N50
56,861

Learn more about blob plots.

Blob Plot

Variants

PsiR c.1031C>T p.Ala344Val missense variant moderate CM039007.1 1655743

IGV: Start, Jump

G/A
PsiT1 c.362A>G p.Glu121Gly missense variant & splice region variant moderate CM039007.1 1663786

IGV: Start, Jump

A/G
PsiT1 c.640A>C p.Ile214Leu missense variant moderate CM039007.1 1664184

IGV: Start, Jump

A/C
PsiT1 c.668C>G p.Ser223* stop gained high CM039007.1 1664264

IGV: Start, Jump

C/G
PsiT1 c.737C>T p.Thr246Ile missense variant moderate CM039007.1 1664333

IGV: Start, Jump

C/T
PsiT1 c.798A>T p.Arg266Ser missense variant moderate CM039007.1 1664394

IGV: Start, Jump

A/T
PsiT1 c.802C>A p.Leu268Ile missense variant moderate CM039007.1 1664398

IGV: Start, Jump

C/A
PsiT1 c.1156A>G p.Thr386Ala missense variant moderate CM039007.1 1664803

IGV: Start, Jump

A/G
PsiT1 c.1513A>G p.Ile505Val missense variant moderate CM039007.1 1665277

IGV: Start, Jump

A/G
PsiT1 c.1616A>G p.His539Arg missense variant moderate CM039007.1 1665560

IGV: Start, Jump

A/G
PsiT1 c.1626G>A p.Met542Ile missense variant moderate CM039007.1 1665570

IGV: Start, Jump

G/A
PsiT1 c.1687A>C p.Ile563Leu missense variant moderate CM039007.1 1665631

IGV: Start, Jump

A/C
PsiT1 c.1690G>A p.Val564Ile missense variant moderate CM039007.1 1665634

IGV: Start, Jump

G/A
PsiT1 c.1714A>G p.Asn572Asp missense variant moderate CM039007.1 1665658

IGV: Start, Jump

A/G
PsiT1 c.1720+1G>T splice donor variant & intron variant high CM039007.1 1665665

IGV: Start, Jump

G/T
PsiT1 c.1735G>A p.Val579Ile missense variant moderate CM039007.1 1666040

IGV: Start, Jump

G/A
PsiT1 c.1736T>C p.Val579Ala missense variant moderate CM039007.1 1666041

IGV: Start, Jump

T/C
PsiT1 c.2038T>G p.Ser680Ala missense variant moderate CM039007.1 1666406

IGV: Start, Jump

T/G
PsiT1 c.2126T>C p.Val709Ala missense variant moderate CM039007.1 1666494

IGV: Start, Jump

T/C
PsiT1 c.2254A>G p.Arg752Gly missense variant moderate CM039007.1 1666622

IGV: Start, Jump

A/G
PsiM c.305G>A p.Arg102Lys missense variant moderate CM039007.1 1674573

IGV: Start, Jump

C/T
PsiD c.66G>T p.Leu22Phe missense variant moderate CM039007.1 1677485

IGV: Start, Jump

C/A

Nearest genetic relatives (All Samples)

0 0.083 0.167 0.250 0.333
  1. 0.013 Treasure-coast-3-PS (PSP10056)
  2. 0.013 Treasure-coast-2-PS (PSP10055)
  3. 0.014 Treasure-coast-1-PS (PSP10054)
  4. 0.281 MGC 2016 unknown strain (PSP10012)
  5. 0.298 Bplus-ITW-WM (PSP10129)
  6. 0.302 Roatan-Honduras-4-Mush (PSP10079)
  7. 0.310 Tosohatchee-print-ITW (PSP10081)
  8. 0.311 Arenal-Volcano-1-Mush (PSP10059)
  9. 0.312 Luminous-lucies-2-PS (PSP10032)
  10. 0.313 Luminous-lucies-3-PS (PSP10033)
  11. 0.313 Luminous-lucies-1-PS (PSP10034)
  12. 0.315 Penvy-1-PS (PSP10045)
  13. 0.315 Penvy-2-SW (PSP10075)
  14. 0.315 Penvy-Col4-PS (PSP10043)
  15. 0.315 Penvy-Col5-PS (PSP10044)
  16. 0.317 Costa-Rica-3-redo-SW (PSP10024)
  17. 0.323 Guapile-ITW-col-WM (PSP10132)
  18. 0.325 Costa-Rica-2-redo-SW (PSP10023)
  19. 0.327 ColumbiaRust-1-SW (PSP10021)
  20. 0.328 Costa-Rica-1-redo-SW (PSP10022)

Most genetically distant strains (All Samples)

0 0.167 0.333 0.500 0.667
  1. 0.660 Bplus-3-PS (PSP10001)
  2. 0.659 GoldenCoast-BAF-A1-UM (PSP10105)
  3. 0.658 GoldenCoast-BAF-A2-UM (PSP10106)
  4. 0.656 Orissa-India-ITW (PSP10071)
  5. 0.653 McKennaii-1-PS (PSP10069)
  6. 0.653 Bplus (PSP10088)
  7. 0.652 True-Albino-Teacher-ITW-WM (PSP10140)
  8. 0.652 HUA-Early (PSP10092)
  9. 0.651 GoldenCoast-BAF-B1-UM (PSP10107)
  10. 0.651 GoldenCoast-BAF-B2-UM (PSP10108)
  11. 0.650 Avery-Albino-ITW-WM (PSP10123)
  12. 0.650 Golden-Teacher (PSP10089)
  13. 0.649 Bplus-1-redo-SW (PSP10014)
  14. 0.649 GoldenTeacher-3-SW (PSP10029)
  15. 0.649 Gulf-Coast (PSP10091)
  16. 0.649 Ecuador-3-SW (PSP10025)
  17. 0.649 Gulf-Coast-BAF (PSP10090)
  18. 0.649 GoldenCoast-UM (PSP10109)
  19. 0.649 Bplus-3-redo-SW (PSP10016)
  20. 0.648 Bplus-2-redo-SW (PSP10015)

Blockchain Registration Information

Transaction ID
216d0f21cf705afbc35845a1eb2c9ff4b115eb7cf52faac97c5906f000c20e36
Stamping Certificate
Download PDF (39.6 KB)
SHASUM Hash
aabf2187758a76cf93bd8fc3aad47f6e3ee2c56b44b4a48c1ba54540066dd0a8
QR code for PSP10082

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