Z-strain-1-Mush

PSP 10083

DNA Source: Mushrooms.com

General Information

Accession Date
June 13, 2021
Report Type
Whole-Genome Sequencing
DNA Source Website
mushrooms.com

Genetic Information

These charts represent the Illumina sequence coverage over the Psilocybin synthase genes.

Psilocybin Synthase Gene Coverage

Learn more about read coverage plots.

Read Coverage
No. of Contigs (>= 25K bp)
360
No. of Contigs (>= 50K bp)
140
Total Length (>= 25K bp)
23,039,714
Total Length (>= 50K bp)
15,444,487
Total Contigs
7,674
Largest Contig
485,472
Total Length
45,219,068
GC (%)
46.05
N50
26,140

Learn more about blob plots.

Blob Plot

Variants

PsiT1 c.362A>G p.Glu121Gly missense variant & splice region variant moderate CM039007.1 1663786

IGV: Start, Jump

A/G
PsiT1 c.640A>C p.Ile214Leu missense variant moderate CM039007.1 1664184

IGV: Start, Jump

A/C
PsiT1 c.737C>T p.Thr246Ile missense variant moderate CM039007.1 1664333

IGV: Start, Jump

C/T
PsiT1 c.798A>T p.Arg266Ser missense variant moderate CM039007.1 1664394

IGV: Start, Jump

A/T
PsiT1 c.1156A>G p.Thr386Ala missense variant moderate CM039007.1 1664803

IGV: Start, Jump

A/G
PsiT1 c.1513A>G p.Ile505Val missense variant moderate CM039007.1 1665277

IGV: Start, Jump

A/G
PsiT1 c.1616A>G p.His539Arg missense variant moderate CM039007.1 1665560

IGV: Start, Jump

A/G
PsiT1 c.1626G>A p.Met542Ile missense variant moderate CM039007.1 1665570

IGV: Start, Jump

G/A
PsiT1 c.1687A>C p.Ile563Leu missense variant moderate CM039007.1 1665631

IGV: Start, Jump

A/C
PsiT1 c.1690G>A p.Val564Ile missense variant moderate CM039007.1 1665634

IGV: Start, Jump

G/A
PsiT1 c.1714A>G p.Asn572Asp missense variant moderate CM039007.1 1665658

IGV: Start, Jump

A/G
PsiT1 c.1720+1G>T splice donor variant & intron variant high CM039007.1 1665665

IGV: Start, Jump

G/T
PsiT1 c.1735G>A p.Val579Ile missense variant moderate CM039007.1 1666040

IGV: Start, Jump

G/A
PsiT1 c.1736T>C p.Val579Ala missense variant moderate CM039007.1 1666041

IGV: Start, Jump

T/C
PsiT1 c.2038T>G p.Ser680Ala missense variant moderate CM039007.1 1666406

IGV: Start, Jump

T/G
PsiT1 c.2065T>G p.Leu689Val missense variant moderate CM039007.1 1666433

IGV: Start, Jump

T/G
PsiT1 c.2237A>G p.Glu746Gly missense variant moderate CM039007.1 1666605

IGV: Start, Jump

A/G
PsiT1 c.2254A>G p.Arg752Gly missense variant moderate CM039007.1 1666622

IGV: Start, Jump

A/G
PsiT1 c.2573A>T p.Gln858Leu missense variant moderate CM039007.1 1666941

IGV: Start, Jump

A/T
PsiM c.305G>A p.Arg102Lys missense variant moderate CM039007.1 1674573

IGV: Start, Jump

C/T
PsiM c.129A>T p.Glu43Asp missense variant moderate CM039007.1 1674903

IGV: Start, Jump

T/A
PsiD c.66G>T p.Leu22Phe missense variant moderate CM039007.1 1677485

IGV: Start, Jump

C/A

Nearest genetic relatives (All Samples)

0 0.092 0.183 0.275 0.367
  1. 0.314 MGC 2016 unknown strain (PSP10012)
  2. 0.316 Orissa-India-4-Mush (PSP10073)
  3. 0.323 Chitwan-1-SW (PSP10002)
  4. 0.331 Luminous-lucies-2-PS (PSP10032)
  5. 0.331 Luminous-lucies-3-PS (PSP10033)
  6. 0.331 Arenal-Volcano-1-Mush (PSP10059)
  7. 0.331 Luminous-lucies-1-PS (PSP10034)
  8. 0.332 Bplus-ITW-WM (PSP10129)
  9. 0.333 Orissa-India-1-Mush (PSP10072)
  10. 0.333 Penvy-2-SW (PSP10075)
  11. 0.334 Penvy-1-PS (PSP10045)
  12. 0.334 Penvy-Col4-PS (PSP10043)
  13. 0.334 Penvy-Col5-PS (PSP10044)
  14. 0.342 Roatan-Honduras-4-Mush (PSP10079)
  15. 0.343 Treasure-Coast-2-Mush (PSP10082)
  16. 0.344 Treasure-coast-3-PS (PSP10056)
  17. 0.344 Tosohatchee-print-ITW (PSP10081)
  18. 0.345 Treasure-coast-1-PS (PSP10054)
  19. 0.345 Treasure-coast-2-PS (PSP10055)
  20. 0.347 ColumbiaRust-1-SW (PSP10021)

Most genetically distant strains (All Samples)

0 0.150 0.300 0.450 0.600
  1. 0.585 Bplus-3-PS (PSP10001)
  2. 0.580 GoldenCoast-BAF-A1-UM (PSP10105)
  3. 0.579 GoldenCoast-BAF-A2-UM (PSP10106)
  4. 0.579 Orissa-India-ITW (PSP10071)
  5. 0.577 True-Albino-Teacher-ITW-WM (PSP10140)
  6. 0.577 GoldenCoast-BAF-B1-UM (PSP10107)
  7. 0.576 GoldenCoast-BAF-B2-UM (PSP10108)
  8. 0.575 McKennaii-1-PS (PSP10069)
  9. 0.574 Bplus-3-redo-SW (PSP10016)
  10. 0.574 Bplus (PSP10088)
  11. 0.574 Bplus-1-redo-SW (PSP10014)
  12. 0.574 Ecuador-3-SW (PSP10025)
  13. 0.574 Bplus-2-redo-SW (PSP10015)
  14. 0.573 Gulf-Coast-BAF (PSP10090)
  15. 0.573 Avery-Albino-ITW-WM (PSP10123)
  16. 0.573 GoldenTeacher-3-SW (PSP10029)
  17. 0.573 HUA-Early (PSP10092)
  18. 0.572 GoldenTeacher-2-SW (PSP10028)
  19. 0.572 Burma-1-SW (PSP10020)
  20. 0.572 Gulf-Coast (PSP10091)

Blockchain Registration Information

Transaction ID
8933525c93705a9246921d7b6dca69329067819ff949808d73f3444ef006fe23
Stamping Certificate
Download PDF (39.7 KB)
SHASUM Hash
c8ed925c8ebabc6d43482792d517f3ab4b43d07b9b4f651b307d4e09c421ed08
QR code for PSP10083

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