Golden-Teacher

PSP 10089

DNA Source: USA Mycology & More

General Information

Accession Date
March 15, 2022
Report Type
Whole-Genome Sequencing

Genetic Information

These charts represent the Illumina sequence coverage over the Psilocybin synthase genes.

Psilocybin Synthase Gene Coverage

Learn more about read coverage plots.

Read Coverage
No. of Contigs (>= 25K bp)
422
No. of Contigs (>= 50K bp)
202
Total Length (>= 25K bp)
29,547,351
Total Length (>= 50K bp)
21,575,731
Total Contigs
2,476
Largest Contig
475,642
Total Length
39,599,662
GC (%)
46.13
N50
57,581

Learn more about blob plots.

Blob Plot

Variants

PsiT1 c.362A>G p.Glu121Gly missense variant & splice region variant moderate CM039007.1 1663786

IGV: Start, Jump

A/G
PsiT1 c.640A>C p.Ile214Leu missense variant moderate CM039007.1 1664184

IGV: Start, Jump

A/C
PsiT1 c.1735G>A p.Val579Ile missense variant moderate CM039007.1 1666040

IGV: Start, Jump

G/A
PsiT1 c.1736T>C p.Val579Ala missense variant moderate CM039007.1 1666041

IGV: Start, Jump

T/C
PsiT1 c.2254A>G p.Arg752Gly missense variant moderate CM039007.1 1666622

IGV: Start, Jump

A/G
PsiH c.20C>T p.Ser7Phe missense variant moderate CM039007.1 1667530

IGV: Start, Jump

C/T
PsiM c.305G>A p.Arg102Lys missense variant moderate CM039007.1 1674573

IGV: Start, Jump

C/T
PsiD c.617G>A p.Gly206Asp missense variant moderate CM039007.1 1676885

IGV: Start, Jump

C/T
PsiD c.616G>A p.Gly206Ser missense variant moderate CM039007.1 1676886

IGV: Start, Jump

C/T
PsiD c.66G>T p.Leu22Phe missense variant moderate CM039007.1 1677485

IGV: Start, Jump

C/A

Nearest genetic relatives (All Samples)

0 0.033 0.067 0.100 0.133
  1. 0.031 GoldenTeacher-3-SW (PSP10029)
  2. 0.031 Huautla-3-PS (PSP10005)
  3. 0.033 Z-strain-3-PS (PSP10084)
  4. 0.033 Maui-2-PS (PSP10041)
  5. 0.033 Ecuador-3-SW (PSP10025)
  6. 0.034 Ecuador-3-PS (PSP10061)
  7. 0.035 Huautla-3-redo-SW (PSP10031)
  8. 0.035 Maui-1-PS (PSP10040)
  9. 0.036 Maui-3-PS (PSP10042)
  10. 0.037 Gulf-Coast (PSP10091)
  11. 0.038 Gulf-Coast-BAF (PSP10090)
  12. 0.039 GoldenCoast-BAF-A2-UM (PSP10106)
  13. 0.039 Huautla-2-redo-SW (PSP10030)
  14. 0.039 GoldenTeacher-2-SW (PSP10028)
  15. 0.040 GoldenCoast-BAF-B2-UM (PSP10108)
  16. 0.040 PES-2-SW (PSP10008)
  17. 0.040 GoldenCoast-BAF-B1-UM (PSP10107)
  18. 0.040 GoldenTeacher-1-SW (PSP10027)
  19. 0.041 GoldenCoast-BAF-A1-UM (PSP10105)
  20. 0.041 Orissa-India-ITW (PSP10071)

Most genetically distant strains (All Samples)

0 0.183 0.367 0.550 0.733
  1. 0.717 Penvy-1-PS (PSP10045)
  2. 0.717 Penvy-Col5-PS (PSP10044)
  3. 0.717 Penvy-Col4-PS (PSP10043)
  4. 0.716 Penvy-2-SW (PSP10075)
  5. 0.662 Costa-Rica-1-redo-SW (PSP10022)
  6. 0.660 Costa-Rica-2-redo-SW (PSP10023)
  7. 0.652 Treasure-coast-3-PS (PSP10056)
  8. 0.652 Treasure-coast-1-PS (PSP10054)
  9. 0.652 Treasure-coast-2-PS (PSP10055)
  10. 0.650 Treasure-Coast-2-Mush (PSP10082)
  11. 0.628 Costa-Rica-3-redo-SW (PSP10024)
  12. 0.618 Bplus-ITW-WM (PSP10129)
  13. 0.608 Orissa-India-1-Mush (PSP10072)
  14. 0.605 Arenal-Volcano-1-Mush (PSP10059)
  15. 0.604 Orissa-India-4-Mush (PSP10073)
  16. 0.601 Luminous-lucies-2-PS (PSP10032)
  17. 0.600 Luminous-lucies-1-PS (PSP10034)
  18. 0.600 Luminous-lucies-3-PS (PSP10033)
  19. 0.600 ColumbiaRust-1-SW (PSP10021)
  20. 0.599 Roatan-Honduras-4-Mush (PSP10079)

Blockchain Registration Information

Transaction ID
1355d80a811a36b319c70fad208dd3ef607d338e6e864a65f9d0466d743ac6c0
Stamping Certificate
Download PDF (39.5 KB)
SHASUM Hash
6e7509af82001c5c7d1d5a6a0035c2733fb8cd634461325c5bb30d9d4d795219
QR code for PSP10089

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