Gulf-Coast

PSP 10091

DNA Source: USA Mycology & More

General Information

Accession Date
March 15, 2022
Report Type
Whole-Genome Sequencing

Genetic Information

These charts represent the Illumina sequence coverage over the Psilocybin synthase genes.

Psilocybin Synthase Gene Coverage

Learn more about read coverage plots.

Read Coverage
No. of Contigs (>= 25K bp)
417
No. of Contigs (>= 50K bp)
208
Total Length (>= 25K bp)
28,702,257
Total Length (>= 50K bp)
21,149,429
Total Contigs
2,732
Largest Contig
419,590
Total Length
39,554,149
GC (%)
46.11
N50
54,678

Learn more about blob plots.

Blob Plot

Variants

PsiT1 c.362A>G p.Glu121Gly missense variant & splice region variant moderate CM039007.1 1663786

IGV: Start, Jump

A/G
PsiT1 c.640A>C p.Ile214Leu missense variant moderate CM039007.1 1664184

IGV: Start, Jump

A/C
PsiT1 c.1735G>A p.Val579Ile missense variant moderate CM039007.1 1666040

IGV: Start, Jump

G/A
PsiT1 c.1736T>C p.Val579Ala missense variant moderate CM039007.1 1666041

IGV: Start, Jump

T/C
PsiT1 c.2254A>G p.Arg752Gly missense variant moderate CM039007.1 1666622

IGV: Start, Jump

A/G
PsiH c.20C>T p.Ser7Phe missense variant moderate CM039007.1 1667530

IGV: Start, Jump

C/T
PsiM c.305G>A p.Arg102Lys missense variant moderate CM039007.1 1674573

IGV: Start, Jump

C/T
PsiD c.617G>A p.Gly206Asp missense variant moderate CM039007.1 1676885

IGV: Start, Jump

C/T
PsiD c.616G>A p.Gly206Ser missense variant moderate CM039007.1 1676886

IGV: Start, Jump

C/T
PsiD c.66G>T p.Leu22Phe missense variant moderate CM039007.1 1677485

IGV: Start, Jump

C/A

Nearest genetic relatives (All Samples)

0 0.033 0.067 0.100 0.133
  1. 0.023 Gulf-Coast-BAF (PSP10090)
  2. 0.025 GoldenCoast-BAF-B2-UM (PSP10108)
  3. 0.025 GoldenCoast-BAF-B1-UM (PSP10107)
  4. 0.037 Golden-Teacher (PSP10089)
  5. 0.042 Z-strain-3-PS (PSP10084)
  6. 0.045 Puerto-Rican-ITW (PSP10078)
  7. 0.050 GoldenTeacher-3-SW (PSP10029)
  8. 0.051 Huautla-3-PS (PSP10005)
  9. 0.052 Maui-2-PS (PSP10041)
  10. 0.052 Ecuador-3-SW (PSP10025)
  11. 0.053 Ecuador-3-PS (PSP10061)
  12. 0.054 Huautla-3-redo-SW (PSP10031)
  13. 0.055 Maui-1-PS (PSP10040)
  14. 0.055 Maui-3-PS (PSP10042)
  15. 0.057 Huautla-2-redo-SW (PSP10030)
  16. 0.058 GoldenCoast-BAF-A2-UM (PSP10106)
  17. 0.058 GoldenTeacher-2-SW (PSP10028)
  18. 0.059 GoldenTeacher-1-SW (PSP10027)
  19. 0.060 GoldenCoast-BAF-A1-UM (PSP10105)
  20. 0.060 PES-2-SW (PSP10008)

Most genetically distant strains (All Samples)

0 0.183 0.367 0.550 0.733
  1. 0.718 Penvy-1-PS (PSP10045)
  2. 0.717 Penvy-Col5-PS (PSP10044)
  3. 0.717 Penvy-Col4-PS (PSP10043)
  4. 0.716 Penvy-2-SW (PSP10075)
  5. 0.662 Costa-Rica-1-redo-SW (PSP10022)
  6. 0.659 Costa-Rica-2-redo-SW (PSP10023)
  7. 0.651 Treasure-coast-1-PS (PSP10054)
  8. 0.651 Treasure-coast-2-PS (PSP10055)
  9. 0.651 Treasure-coast-3-PS (PSP10056)
  10. 0.649 Treasure-Coast-2-Mush (PSP10082)
  11. 0.630 Costa-Rica-3-redo-SW (PSP10024)
  12. 0.616 Bplus-ITW-WM (PSP10129)
  13. 0.610 Orissa-India-1-Mush (PSP10072)
  14. 0.609 Arenal-Volcano-1-Mush (PSP10059)
  15. 0.608 Orissa-India-4-Mush (PSP10073)
  16. 0.607 ColumbiaRust-1-SW (PSP10021)
  17. 0.606 Luminous-lucies-2-PS (PSP10032)
  18. 0.605 Luminous-lucies-1-PS (PSP10034)
  19. 0.605 Luminous-lucies-3-PS (PSP10033)
  20. 0.604 Roatan-Honduras-4-Mush (PSP10079)

Blockchain Registration Information

Transaction ID
130f15f8e236b76bb7fd85f769b4f42afb8171f9b568b1c830771623ef303fa6
Stamping Certificate
Download PDF (39.8 KB)
SHASUM Hash
c4cf905c46bcc9089d75e8b393a8c6a7a9e6ed6d03f7d7f56181ea29ff18a69e
QR code for PSP10091

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