AAplus-4-Mush

PSP 10057

DNA Source: Mushrooms.com

General Information

Accession Date
June 13, 2021
Report Type
Whole-Genome Sequencing
DNA Source Website
mushrooms.com

Genetic Information

These charts represent the Illumina sequence coverage over the Psilocybin synthase genes.

Psilocybin Synthase Gene Coverage

Learn more about read coverage plots.

Read Coverage
No. of Contigs (>= 25K bp)
467
No. of Contigs (>= 50K bp)
154
Total Length (>= 25K bp)
23,195,783
Total Length (>= 50K bp)
12,311,256
Total Contigs
4,970
Largest Contig
302,174
Total Length
41,345,670
GC (%)
46.11
N50
29,208

Learn more about blob plots.

Blob Plot

Variants

PsiR c.800T>A p.Met267Lys missense variant moderate CM039007.1 1655974

IGV: Start, Jump

A/T
PsiT1 c.362A>G p.Glu121Gly missense variant & splice region variant moderate CM039007.1 1663786

IGV: Start, Jump

A/G
PsiT1 c.640A>C p.Ile214Leu missense variant moderate CM039007.1 1664184

IGV: Start, Jump

A/C
PsiT1 c.668C>G p.Ser223* stop gained high CM039007.1 1664264

IGV: Start, Jump

C/G
PsiT1 c.1735G>A p.Val579Ile missense variant moderate CM039007.1 1666040

IGV: Start, Jump

G/A
PsiT1 c.1736T>C p.Val579Ala missense variant moderate CM039007.1 1666041

IGV: Start, Jump

T/C
PsiT1 c.1938G>T p.Glu646Asp missense variant moderate CM039007.1 1666243

IGV: Start, Jump

G/T
PsiT1 c.2254A>G p.Arg752Gly missense variant moderate CM039007.1 1666622

IGV: Start, Jump

A/G
PsiH c.20C>T p.Ser7Phe missense variant moderate CM039007.1 1667530

IGV: Start, Jump

C/T
PsiM c.305G>A p.Arg102Lys missense variant moderate CM039007.1 1674573

IGV: Start, Jump

C/T
PsiD c.617G>A p.Gly206Asp missense variant moderate CM039007.1 1676885

IGV: Start, Jump

C/T
PsiD c.616G>A p.Gly206Ser missense variant moderate CM039007.1 1676886

IGV: Start, Jump

C/T
PsiD c.66G>T p.Leu22Phe missense variant moderate CM039007.1 1677485

IGV: Start, Jump

C/A

Nearest genetic relatives (All Samples)

0 0.083 0.167 0.250 0.333
  1. 0.021 Albino-Aplus-3-PS (PSP10000)
  2. 0.067 Albino-Aplus-1-SW (PSP10013)
  3. 0.070 Aplusplus (PSP10085)
  4. 0.079 Panaeolus-Copelandia-Tropicalis-2-Mush (PSP10077)
  5. 0.133 Amazon-ITW-WM (PSP10122)
  6. 0.231 Blue-Magnolia-Rust-UM-WM (PSP10127)
  7. 0.236 Leucistic GT1-ITW (PSP10066)
  8. 0.247 Leucistic GT2-ITW (PSP10067)
  9. 0.275 Leucistic-Ecuador-ITW (PSP10065)
  10. 0.275 Blue-Meanie-ITW-WM (PSP10128)
  11. 0.281 Leucistic-Ecuador-ITW-WM (PSP10133)
  12. 0.282 Bplus Denver (PSP10010)
  13. 0.284 BplusONT-WM (PSP10141)
  14. 0.303 Golden-Teacher (PSP10089)
  15. 0.306 Ecuador-3-PS (PSP10061)
  16. 0.307 APlusPlus-Leucistic-ITW (PSP10058)
  17. 0.307 Z-strain-3-PS (PSP10084)
  18. 0.309 Thailand-Koh-Samui-1-Mush (PSP10080)
  19. 0.309 Huautla-3-PS (PSP10005)
  20. 0.310 GoldenTeacher-3-SW (PSP10029)

Most genetically distant strains (All Samples)

0 0.142 0.283 0.425 0.567
  1. 0.566 Penvy-Col4-PS (PSP10043)
  2. 0.566 Penvy-1-PS (PSP10045)
  3. 0.566 Penvy-Col5-PS (PSP10044)
  4. 0.565 Penvy-2-SW (PSP10075)
  5. 0.548 Samui-1-redo-PS (PSP10047)
  6. 0.540 Costa-Rica-2-redo-SW (PSP10023)
  7. 0.540 Samui-2-redo-PS (PSP10049)
  8. 0.539 Costa-Rica-1-redo-SW (PSP10022)
  9. 0.532 WFB-UM-WM (PSP10121)
  10. 0.529 WFB-UM (PSP10112)
  11. 0.517 Costa-Rica-3-redo-SW (PSP10024)
  12. 0.513 Treasure-coast-2-PS (PSP10055)
  13. 0.513 Treasure-coast-1-PS (PSP10054)
  14. 0.512 Treasure-coast-3-PS (PSP10056)
  15. 0.510 Treasure-Coast-2-Mush (PSP10082)
  16. 0.504 ColumbiaRust-1-SW (PSP10021)
  17. 0.503 Bplus-ITW-WM (PSP10129)
  18. 0.501 Tosohatchee-print-ITW (PSP10081)
  19. 0.497 Orissa-India-1-Mush (PSP10072)
  20. 0.492 Chitwan-1-SW (PSP10002)

Blockchain Registration Information

Transaction ID
7c29ea025228522e6ee9e9f419634ba536a8ea4687cc2f8dc6b43f5cd4141905
Stamping Certificate
Download PDF (39.7 KB)
SHASUM Hash
e36081153d0c5b5c5a8a952931cd20380bebf717115323538f90d8bf492c9098
QR code for PSP10057

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