ColumbiaRust-1-SW

PSP 10021

DNA Source: SporeWorks

General Information

Accession Date
May 11, 2021
Report Type
Whole-Genome Sequencing
DNA Source Website
sporeworks.com

Genetic Information

These charts represent the Illumina sequence coverage over the Psilocybin synthase genes.

Psilocybin Synthase Gene Coverage

Learn more about read coverage plots.

Read Coverage
No. of Contigs (>= 25K bp)
393
No. of Contigs (>= 50K bp)
198
Total Length (>= 25K bp)
28,249,088
Total Length (>= 50K bp)
21,444,823
Total Contigs
3,424
Largest Contig
640,766
Total Length
40,812,283
GC (%)
46.09
N50
55,984

Learn more about blob plots.

Blob Plot

Variants

PsiT1 c.362A>G p.Glu121Gly missense variant & splice region variant moderate CM039007.1 1663786

IGV: Start, Jump

A/G
PsiT1 c.640A>C p.Ile214Leu missense variant moderate CM039007.1 1664184

IGV: Start, Jump

A/C
PsiT1 c.1735G>A p.Val579Ile missense variant moderate CM039007.1 1666040

IGV: Start, Jump

G/A
PsiT1 c.1736T>C p.Val579Ala missense variant moderate CM039007.1 1666041

IGV: Start, Jump

T/C
PsiT1 c.2254A>G p.Arg752Gly missense variant moderate CM039007.1 1666622

IGV: Start, Jump

A/G
PsiM c.305G>A p.Arg102Lys missense variant moderate CM039007.1 1674573

IGV: Start, Jump

C/T
PsiD c.66G>T p.Leu22Phe missense variant moderate CM039007.1 1677485

IGV: Start, Jump

C/A

Nearest genetic relatives (All Samples)

0 0.092 0.183 0.275 0.367
  1. 0.240 WFB-UM-WM (PSP10121)
  2. 0.240 WFB-UM (PSP10112)
  3. 0.314 Roatan-Honduras-4-Mush (PSP10079)
  4. 0.315 Arenal-Volcano-1-Mush (PSP10059)
  5. 0.316 Luminous-lucies-2-PS (PSP10032)
  6. 0.316 Luminous-lucies-3-PS (PSP10033)
  7. 0.316 Luminous-lucies-1-PS (PSP10034)
  8. 0.321 Costa-Rica-3-redo-SW (PSP10024)
  9. 0.324 Bplus-ITW-WM (PSP10129)
  10. 0.325 Guapile-ITW-col-WM (PSP10132)
  11. 0.327 Treasure-Coast-2-Mush (PSP10082)
  12. 0.327 Treasure-coast-3-PS (PSP10056)
  13. 0.327 Treasure-coast-2-PS (PSP10055)
  14. 0.327 Treasure-coast-1-PS (PSP10054)
  15. 0.331 Costa-Rica-1-redo-SW (PSP10022)
  16. 0.333 Penvy-Col5-PS (PSP10044)
  17. 0.333 Penvy-1-PS (PSP10045)
  18. 0.333 Penvy-Col4-PS (PSP10043)
  19. 0.333 Penvy-2-SW (PSP10075)
  20. 0.337 Costa-Rica-2-redo-SW (PSP10023)

Most genetically distant strains (All Samples)

0 0.158 0.317 0.475 0.633
  1. 0.611 Puerto-Rican-ITW (PSP10078)
  2. 0.610 Blue-Meanie-ITW-WM (PSP10128)
  3. 0.609 GoldenCoast-BAF-B1-UM (PSP10107)
  4. 0.609 Bplus-3-PS (PSP10001)
  5. 0.608 GoldenCoast-BAF-B2-UM (PSP10108)
  6. 0.607 GoldenCoast-BAF-A1-UM (PSP10105)
  7. 0.607 Gulf-Coast-BAF (PSP10090)
  8. 0.607 Huautla-2-redo-SW (PSP10030)
  9. 0.607 GoldenCoast-BAF-A2-UM (PSP10106)
  10. 0.607 Gulf-Coast (PSP10091)
  11. 0.606 Bplus-1-redo-SW (PSP10014)
  12. 0.606 True-Albino-Teacher-ITW-WM (PSP10140)
  13. 0.606 Bplus-2-redo-SW (PSP10015)
  14. 0.606 Bplus-3-redo-SW (PSP10016)
  15. 0.606 Burma-1-SW (PSP10020)
  16. 0.605 Cambodian--1-PS (PSP10060)
  17. 0.605 Bplus (PSP10088)
  18. 0.605 Huautla-3-PS (PSP10005)
  19. 0.605 Orissa-India-ITW (PSP10071)
  20. 0.605 Huautla-3-redo-SW (PSP10031)

Blockchain Registration Information

Transaction ID
b4f743fb38a1c8ea62ff86b7de2a895cca847d7313ad5574a8d07ba22bc7438a
Stamping Certificate
Download PDF (39.7 KB)
SHASUM Hash
25cfae81d6087d08790d0d1e23e2970582f2cd4547a03c5307d1f81e9d676c19
QR code for PSP10021

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