Thailand-Koh-Samui-1-Mush

PSP 10080

DNA Source: Mushrooms.com

General Information

Accession Date
June 13, 2021
Report Type
Whole-Genome Sequencing
DNA Source Website
mushrooms.com

Genetic Information

These charts represent the Illumina sequence coverage over the Psilocybin synthase genes.

Psilocybin Synthase Gene Coverage

Learn more about read coverage plots.

Read Coverage
No. of Contigs (>= 25K bp)
389
No. of Contigs (>= 50K bp)
126
Total Length (>= 25K bp)
20,892,367
Total Length (>= 50K bp)
11,874,858
Total Contigs
10,693
Largest Contig
414,879
Total Length
46,572,765
GC (%)
46.04
N50
20,342

Learn more about blob plots.

Blob Plot

Variants

PsiT1 c.362A>G p.Glu121Gly missense variant & splice region variant moderate CM039007.1 1663786

IGV: Start, Jump

A/G
PsiT1 c.496A>C p.Lys166Gln missense variant moderate CM039007.1 1663979

IGV: Start, Jump

A/C
PsiT1 c.640A>C p.Ile214Leu missense variant moderate CM039007.1 1664184

IGV: Start, Jump

A/C
PsiT1 c.668C>G p.Ser223* stop gained high CM039007.1 1664264

IGV: Start, Jump

C/G
PsiT1 c.737C>T p.Thr246Ile missense variant moderate CM039007.1 1664333

IGV: Start, Jump

C/T
PsiT1 c.798A>T p.Arg266Ser missense variant moderate CM039007.1 1664394

IGV: Start, Jump

A/T
PsiT1 c.1156A>G p.Thr386Ala missense variant moderate CM039007.1 1664803

IGV: Start, Jump

A/G
PsiT1 c.1513A>G p.Ile505Val missense variant moderate CM039007.1 1665277

IGV: Start, Jump

A/G
PsiT1 c.1616A>G p.His539Arg missense variant moderate CM039007.1 1665560

IGV: Start, Jump

A/G
PsiT1 c.1626G>A p.Met542Ile missense variant moderate CM039007.1 1665570

IGV: Start, Jump

G/A
PsiT1 c.1687A>C p.Ile563Leu missense variant moderate CM039007.1 1665631

IGV: Start, Jump

A/C
PsiT1 c.1690G>A p.Val564Ile missense variant moderate CM039007.1 1665634

IGV: Start, Jump

G/A
PsiT1 c.1714A>G p.Asn572Asp missense variant moderate CM039007.1 1665658

IGV: Start, Jump

A/G
PsiT1 c.1720+1G>T splice donor variant & intron variant high CM039007.1 1665665

IGV: Start, Jump

G/T
PsiT1 c.1735G>A p.Val579Ile missense variant moderate CM039007.1 1666040

IGV: Start, Jump

G/A
PsiT1 c.1736T>C p.Val579Ala missense variant moderate CM039007.1 1666041

IGV: Start, Jump

T/C
PsiT1 c.2038T>G p.Ser680Ala missense variant moderate CM039007.1 1666406

IGV: Start, Jump

T/G
PsiT1 c.2065T>G p.Leu689Val missense variant moderate CM039007.1 1666433

IGV: Start, Jump

T/G
PsiT1 c.2237A>G p.Glu746Gly missense variant moderate CM039007.1 1666605

IGV: Start, Jump

A/G
PsiT1 c.2254A>G p.Arg752Gly missense variant moderate CM039007.1 1666622

IGV: Start, Jump

A/G
PsiT1 c.2573A>T p.Gln858Leu missense variant moderate CM039007.1 1666941

IGV: Start, Jump

A/T
PsiH c.20C>T p.Ser7Phe missense variant moderate CM039007.1 1667530

IGV: Start, Jump

C/T
PsiM c.305G>A p.Arg102Lys missense variant moderate CM039007.1 1674573

IGV: Start, Jump

C/T
PsiD c.617G>A p.Gly206Asp missense variant moderate CM039007.1 1676885

IGV: Start, Jump

C/T
PsiD c.616G>A p.Gly206Ser missense variant moderate CM039007.1 1676886

IGV: Start, Jump

C/T
PsiD c.66G>T p.Leu22Phe missense variant moderate CM039007.1 1677485

IGV: Start, Jump

C/A
PsiD c.5A>G p.Gln2Arg missense variant moderate CM039007.1 1677603

IGV: Start, Jump

T/C
Fvcpc2 c.271G>A p.Asp91Asn missense variant moderate CM038999.1 1972978

IGV: Start, Jump

G/A

Nearest genetic relatives (All Samples)

0 0.092 0.183 0.275 0.367
  1. 0.201 Samui-2-PS (PSP10048)
  2. 0.228 Golden-Teacher Denver (PSP10011)
  3. 0.242 Blue-Magnolia-Rust-UM-WM (PSP10127)
  4. 0.252 BM1-UM (PSP10098)
  5. 0.256 BM16 (PSP10087)
  6. 0.280 KOH-Samui-1-ITW (PSP10063)
  7. 0.309 AAplus-4-Mush (PSP10057)
  8. 0.309 Albino-Aplus-3-PS (PSP10000)
  9. 0.312 KOH-Samui-2-ITW (PSP10064)
  10. 0.317 Samui-2-redo-PS (PSP10049)
  11. 0.324 Panaeolus-Copelandia-Tropicalis-2-Mush (PSP10077)
  12. 0.326 PES-2-SW (PSP10008)
  13. 0.329 Ecuador-3-PS (PSP10061)
  14. 0.329 Bplus Denver (PSP10010)
  15. 0.334 BplusONT-WM (PSP10141)
  16. 0.335 Maui-3-PS (PSP10042)
  17. 0.335 GoldenTeacher-1-SW (PSP10027)
  18. 0.335 Maui-2-PS (PSP10041)
  19. 0.336 Maui-1-PS (PSP10040)
  20. 0.337 GoldenTeacher-3-SW (PSP10029)

Most genetically distant strains (All Samples)

0 0.133 0.267 0.400 0.533
  1. 0.509 Penvy-1-PS (PSP10045)
  2. 0.509 Penvy-Col5-PS (PSP10044)
  3. 0.509 Penvy-Col4-PS (PSP10043)
  4. 0.508 Penvy-2-SW (PSP10075)
  5. 0.501 Costa-Rica-1-redo-SW (PSP10022)
  6. 0.499 Costa-Rica-2-redo-SW (PSP10023)
  7. 0.475 Treasure-coast-2-PS (PSP10055)
  8. 0.474 Treasure-coast-3-PS (PSP10056)
  9. 0.474 Treasure-coast-1-PS (PSP10054)
  10. 0.474 ColumbiaRust-1-SW (PSP10021)
  11. 0.472 Treasure-Coast-2-Mush (PSP10082)
  12. 0.468 Bplus-ITW-WM (PSP10129)
  13. 0.466 WFB-UM-WM (PSP10121)
  14. 0.464 Guapile-ITW-col-WM (PSP10132)
  15. 0.462 WFB-UM (PSP10112)
  16. 0.459 Tosohatchee-print-ITW (PSP10081)
  17. 0.454 Orissa-India-1-Mush (PSP10072)
  18. 0.453 Costa-Rica-3-redo-SW (PSP10024)
  19. 0.440 Pink-Buffalo-2-PS (PSP10046)
  20. 0.429 Roatan-Honduras-4-Mush (PSP10079)

Blockchain Registration Information

Transaction ID
631773eb0f9498de4ab1b5c12699be67d37fd8513c51c6d19d8bbd8c9c605b16
Stamping Certificate
Download PDF (39.8 KB)
SHASUM Hash
103759e3bc605d5d754afb43e29414e19caa609f4160d1a1e16b406af6a4f06d
QR code for PSP10080

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