Orissa-India-1-Mush

PSP 10072

DNA Source: Mushrooms.com

General Information

Accession Date
June 13, 2021
Report Type
Whole-Genome Sequencing
DNA Source Website
mushrooms.com

Genetic Information

These charts represent the Illumina sequence coverage over the Psilocybin synthase genes.

Psilocybin Synthase Gene Coverage

Learn more about read coverage plots.

Read Coverage
No. of Contigs (>= 25K bp)
480
No. of Contigs (>= 50K bp)
147
Total Length (>= 25K bp)
22,444,447
Total Length (>= 50K bp)
11,006,360
Total Contigs
42,305
Largest Contig
196,502
Total Length
103,088,423
GC (%)
46.04
N50
6,089

Learn more about blob plots.

Blob Plot

Variants

PsiT1 c.496A>C p.Lys166Gln missense variant moderate CM039007.1 1663979

IGV: Start, Jump

A/C
PsiT1 c.874G>T p.Ala292Ser missense variant moderate CM039007.1 1664470

IGV: Start, Jump

G/T
PsiT1 c.1702C>A p.Leu568Met missense variant moderate CM039007.1 1665646

IGV: Start, Jump

C/A
PsiT1 c.2237A>G p.Glu746Gly missense variant moderate CM039007.1 1666605

IGV: Start, Jump

A/G
PsiH c.363C>A p.Asp121Glu missense variant moderate CM039007.1 1667977

IGV: Start, Jump

C/A
PsiH c.379A>G p.Arg127Gly missense variant moderate CM039007.1 1667993

IGV: Start, Jump

A/G
PsiH c.404G>C p.Ser135Thr missense variant moderate CM039007.1 1668018

IGV: Start, Jump

G/C
PsiH c.412G>A p.Gly138Ser missense variant moderate CM039007.1 1668026

IGV: Start, Jump

G/A
PsiH c.413G>A p.Gly138Asp missense variant moderate CM039007.1 1668027

IGV: Start, Jump

G/A
PsiH c.419A>G p.Lys140Arg missense variant moderate CM039007.1 1668033

IGV: Start, Jump

A/G
PsiH c.451C>A p.His151Asn missense variant moderate CM039007.1 1668065

IGV: Start, Jump

C/A
PsiH c.1210G>A p.Asp404Asn missense variant moderate CM039007.1 1669172

IGV: Start, Jump

G/A
PsiH c.1220T>A p.Val407Glu missense variant moderate CM039007.1 1669182

IGV: Start, Jump

T/A
PsiM c.357T>A p.Cys119* stop gained high CM039007.1 1674466

IGV: Start, Jump

A/T
PsiD c.928A>G p.Ile310Val missense variant moderate CM039007.1 1676574

IGV: Start, Jump

T/C
PsiD c.919G>C p.Val307Leu missense variant moderate CM039007.1 1676583

IGV: Start, Jump

C/G
PsiD c.856C>A p.Leu286Ile missense variant moderate CM039007.1 1676646

IGV: Start, Jump

G/T
PsiD c.623A>C p.Asn208Thr missense variant moderate CM039007.1 1676879

IGV: Start, Jump

T/G
PsiD c.279G>C p.Gln93His missense variant moderate CM039007.1 1677223

IGV: Start, Jump

C/G

Nearest genetic relatives (All Samples)

0 0.092 0.183 0.275 0.367
  1. 0.094 Orissa-India-4-Mush (PSP10073)
  2. 0.173 Penvy-1-PS (PSP10045)
  3. 0.173 Penvy-2-SW (PSP10075)
  4. 0.173 Penvy-Col5-PS (PSP10044)
  5. 0.173 Penvy-Col4-PS (PSP10043)
  6. 0.331 MGC 2016 unknown strain (PSP10012)
  7. 0.333 Z-strain-1-Mush (PSP10083)
  8. 0.338 Costa-Rica-1-redo-SW (PSP10022)
  9. 0.341 Costa-Rica-2-redo-SW (PSP10023)
  10. 0.348 Costa-Rica-3-redo-SW (PSP10024)
  11. 0.349 Bplus-ITW-WM (PSP10129)
  12. 0.354 Roatan-Honduras-4-Mush (PSP10079)
  13. 0.355 ColumbiaRust-1-SW (PSP10021)
  14. 0.358 Treasure-Coast-2-Mush (PSP10082)
  15. 0.360 Treasure-coast-3-PS (PSP10056)
  16. 0.360 Treasure-coast-1-PS (PSP10054)
  17. 0.361 Treasure-coast-2-PS (PSP10055)
  18. 0.361 Arenal-Volcano-1-Mush (PSP10059)
  19. 0.364 Tosohatchee-print-ITW (PSP10081)
  20. 0.366 Luminous-lucies-2-PS (PSP10032)

Most genetically distant strains (All Samples)

0 0.158 0.317 0.475 0.633
  1. 0.617 Bplus-3-PS (PSP10001)
  2. 0.616 Huautla-3-redo-SW (PSP10031)
  3. 0.616 Huautla-2-redo-SW (PSP10030)
  4. 0.616 Huautla-3-PS (PSP10005)
  5. 0.614 GoldenCoast-BAF-B1-UM (PSP10107)
  6. 0.614 Puerto-Rican-ITW (PSP10078)
  7. 0.614 GoldenCoast-BAF-B2-UM (PSP10108)
  8. 0.613 Maui-2-PS (PSP10041)
  9. 0.612 Bplus-2-redo-SW (PSP10015)
  10. 0.612 GoldenCoast-BAF-A1-UM (PSP10105)
  11. 0.612 Maui-1-PS (PSP10040)
  12. 0.611 Bplus-1-redo-SW (PSP10014)
  13. 0.611 Bplus-3-redo-SW (PSP10016)
  14. 0.611 Maui-3-PS (PSP10042)
  15. 0.611 GoldenCoast-BAF-A2-UM (PSP10106)
  16. 0.610 GoldenTeacher-3-SW (PSP10029)
  17. 0.610 Orissa-India-ITW (PSP10071)
  18. 0.610 Ecuador-3-SW (PSP10025)
  19. 0.610 Gulf-Coast-BAF (PSP10090)
  20. 0.610 Gulf-Coast (PSP10091)

Blockchain Registration Information

Transaction ID
387bbc683294cb9aaf7cd1ef23a53bff6d38077d547c9339102e26d05553548d
Stamping Certificate
Download PDF (39.5 KB)
SHASUM Hash
315a6829d505f3299eafe04ae4b86e76c85f7b20540cd6fb1847100365f37873
QR code for PSP10072

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