Malabar-3-SW

PSP 10036

DNA Source: SporeWorks

General Information

Accession Date
May 11, 2021
Report Type
Whole-Genome Sequencing
DNA Source Website
sporeworks.com

Genetic Information

These charts represent the Illumina sequence coverage over the Psilocybin synthase genes.

Psilocybin Synthase Gene Coverage

Learn more about read coverage plots.

Read Coverage
No. of Contigs (>= 25K bp)
403
No. of Contigs (>= 50K bp)
185
Total Length (>= 25K bp)
28,987,592
Total Length (>= 50K bp)
21,302,153
Total Contigs
4,007
Largest Contig
483,915
Total Length
41,342,347
GC (%)
46.13
N50
53,263

Learn more about blob plots.

Blob Plot

Variants

PsiT1 c.362A>G p.Glu121Gly missense variant & splice region variant moderate CM039007.1 1663786

IGV: Start, Jump

A/G
PsiT1 c.640A>C p.Ile214Leu missense variant moderate CM039007.1 1664184

IGV: Start, Jump

A/C
PsiT1 c.1735G>A p.Val579Ile missense variant moderate CM039007.1 1666040

IGV: Start, Jump

G/A
PsiT1 c.1736T>C p.Val579Ala missense variant moderate CM039007.1 1666041

IGV: Start, Jump

T/C
PsiT1 c.2254A>G p.Arg752Gly missense variant moderate CM039007.1 1666622

IGV: Start, Jump

A/G
PsiH c.20C>T p.Ser7Phe missense variant moderate CM039007.1 1667530

IGV: Start, Jump

C/T
PsiM c.305G>A p.Arg102Lys missense variant moderate CM039007.1 1674573

IGV: Start, Jump

C/T
PsiD c.617G>A p.Gly206Asp missense variant moderate CM039007.1 1676885

IGV: Start, Jump

C/T
PsiD c.616G>A p.Gly206Ser missense variant moderate CM039007.1 1676886

IGV: Start, Jump

C/T
PsiD c.66G>T p.Leu22Phe missense variant moderate CM039007.1 1677485

IGV: Start, Jump

C/A

Nearest genetic relatives (All Samples)

0 0.108 0.217 0.325 0.433
  1. 0.016 Malabar-2-SW (PSP10035)
  2. 0.016 Malabar-1-PS (PSP10037)
  3. 0.017 Malabar-3-PS (PSP10039)
  4. 0.017 Malabar-2-PS (PSP10038)
  5. 0.051 Mazatapec-2-SW (PSP10006)
  6. 0.063 Mazatapec-cube-1-Mush (PSP10068)
  7. 0.274 WFB-UM-WM (PSP10121)
  8. 0.274 WFB-UM (PSP10112)
  9. 0.322 BM1b-UM-WM (PSP10125)
  10. 0.324 Mazatapec (PSP10093)
  11. 0.347 BM1-UM (PSP10098)
  12. 0.358 BM16 (PSP10087)
  13. 0.381 Samui-2-PS (PSP10048)
  14. 0.392 Orissa-India-print-ITW (PSP10074)
  15. 0.404 GoldenTeacher-1-SW (PSP10027)
  16. 0.407 PES-2-SW (PSP10008)
  17. 0.408 Thailand-Koh-Samui-1-Mush (PSP10080)
  18. 0.409 KOH-Samui-1-ITW (PSP10063)
  19. 0.409 Maui-2-PS (PSP10041)
  20. 0.410 Maui-1-PS (PSP10040)

Most genetically distant strains (All Samples)

0 0.133 0.267 0.400 0.533
  1. 0.508 Albino-Aplus-1-SW (PSP10013)
  2. 0.502 Penvy-Col5-PS (PSP10044)
  3. 0.502 Penvy-1-PS (PSP10045)
  4. 0.502 Penvy-Col4-PS (PSP10043)
  5. 0.502 Penvy-2-SW (PSP10075)
  6. 0.501 Aplusplus (PSP10085)
  7. 0.495 Panaeolus-Copelandia-Tropicalis-2-Mush (PSP10077)
  8. 0.493 Costa-Rica-1-redo-SW (PSP10022)
  9. 0.488 AAplus-4-Mush (PSP10057)
  10. 0.487 Costa-Rica-2-redo-SW (PSP10023)
  11. 0.487 Albino-Aplus-3-PS (PSP10000)
  12. 0.487 Leucistic GT2-ITW (PSP10067)
  13. 0.486 Orissa-India-1-Mush (PSP10072)
  14. 0.476 Escondido-Mexico-1-Mush (PSP10062)
  15. 0.473 Leucistic GT1-ITW (PSP10066)
  16. 0.466 Costa-Rica-3-redo-SW (PSP10024)
  17. 0.465 Amazon-ITW-WM (PSP10122)
  18. 0.463 Costa-Rica-1-redo-SW (PSP10003)
  19. 0.463 APlusPlus-Leucistic-ITW (PSP10058)
  20. 0.462 Orissa-India-4-Mush (PSP10073)

Blockchain Registration Information

Transaction ID
819e9e6df8651109b97570ec267c2cbc372b49b10b9431ced7d16940d6c23126
Stamping Certificate
Download PDF (39.7 KB)
SHASUM Hash
67ae795678700dfd6927525454fd25eb5504b961f27d05fbcd7790411121b9c8
QR code for PSP10036

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