Malabar-2-PS

PSP 10038

DNA Source: Premium Spores

General Information

Accession Date
May 11, 2021
Report Type
Whole-Genome Sequencing
DNA Source Website
premiumspores.com

Genetic Information

These charts represent the Illumina sequence coverage over the Psilocybin synthase genes.

Psilocybin Synthase Gene Coverage

Learn more about read coverage plots.

Read Coverage
No. of Contigs (>= 25K bp)
401
No. of Contigs (>= 50K bp)
189
Total Length (>= 25K bp)
28,668,513
Total Length (>= 50K bp)
21,210,616
Total Contigs
4,181
Largest Contig
467,384
Total Length
41,468,101
GC (%)
46.12
N50
53,010

Learn more about blob plots.

Blob Plot

Variants

PsiT1 c.362A>G p.Glu121Gly missense variant & splice region variant moderate CM039007.1 1663786

IGV: Start, Jump

A/G
PsiT1 c.640A>C p.Ile214Leu missense variant moderate CM039007.1 1664184

IGV: Start, Jump

A/C
PsiT1 c.1735G>A p.Val579Ile missense variant moderate CM039007.1 1666040

IGV: Start, Jump

G/A
PsiT1 c.1736T>C p.Val579Ala missense variant moderate CM039007.1 1666041

IGV: Start, Jump

T/C
PsiT1 c.2254A>G p.Arg752Gly missense variant moderate CM039007.1 1666622

IGV: Start, Jump

A/G
PsiH c.20C>T p.Ser7Phe missense variant moderate CM039007.1 1667530

IGV: Start, Jump

C/T
PsiM c.305G>A p.Arg102Lys missense variant moderate CM039007.1 1674573

IGV: Start, Jump

C/T
PsiD c.617G>A p.Gly206Asp missense variant moderate CM039007.1 1676885

IGV: Start, Jump

C/T
PsiD c.616G>A p.Gly206Ser missense variant moderate CM039007.1 1676886

IGV: Start, Jump

C/T
PsiD c.66G>T p.Leu22Phe missense variant moderate CM039007.1 1677485

IGV: Start, Jump

C/A

Nearest genetic relatives (All Samples)

0 0.108 0.217 0.325 0.433
  1. 0.014 Malabar-3-PS (PSP10039)
  2. 0.015 Malabar-1-PS (PSP10037)
  3. 0.015 Malabar-2-SW (PSP10035)
  4. 0.017 Malabar-3-SW (PSP10036)
  5. 0.048 Mazatapec-2-SW (PSP10006)
  6. 0.063 Mazatapec-cube-1-Mush (PSP10068)
  7. 0.274 WFB-UM (PSP10112)
  8. 0.274 WFB-UM-WM (PSP10121)
  9. 0.323 BM1b-UM-WM (PSP10125)
  10. 0.324 Mazatapec (PSP10093)
  11. 0.347 BM1-UM (PSP10098)
  12. 0.359 BM16 (PSP10087)
  13. 0.381 Samui-2-PS (PSP10048)
  14. 0.392 Orissa-India-print-ITW (PSP10074)
  15. 0.404 GoldenTeacher-1-SW (PSP10027)
  16. 0.406 PES-2-SW (PSP10008)
  17. 0.408 Thailand-Koh-Samui-1-Mush (PSP10080)
  18. 0.408 KOH-Samui-1-ITW (PSP10063)
  19. 0.409 Maui-2-PS (PSP10041)
  20. 0.409 Ecuador-3-PS (PSP10061)

Most genetically distant strains (All Samples)

0 0.133 0.267 0.400 0.533
  1. 0.508 Albino-Aplus-1-SW (PSP10013)
  2. 0.502 Aplusplus (PSP10085)
  3. 0.501 Penvy-Col5-PS (PSP10044)
  4. 0.501 Penvy-1-PS (PSP10045)
  5. 0.501 Penvy-Col4-PS (PSP10043)
  6. 0.501 Penvy-2-SW (PSP10075)
  7. 0.495 Panaeolus-Copelandia-Tropicalis-2-Mush (PSP10077)
  8. 0.493 Costa-Rica-1-redo-SW (PSP10022)
  9. 0.487 Costa-Rica-2-redo-SW (PSP10023)
  10. 0.487 AAplus-4-Mush (PSP10057)
  11. 0.487 Albino-Aplus-3-PS (PSP10000)
  12. 0.486 Leucistic GT2-ITW (PSP10067)
  13. 0.486 Orissa-India-1-Mush (PSP10072)
  14. 0.476 Escondido-Mexico-1-Mush (PSP10062)
  15. 0.473 Leucistic GT1-ITW (PSP10066)
  16. 0.466 Costa-Rica-3-redo-SW (PSP10024)
  17. 0.465 Amazon-ITW-WM (PSP10122)
  18. 0.463 Costa-Rica-1-redo-SW (PSP10003)
  19. 0.463 APlusPlus-Leucistic-ITW (PSP10058)
  20. 0.462 Orissa-India-4-Mush (PSP10073)

Blockchain Registration Information

Transaction ID
2d05daf33d495f673770d8e39ad2bfbd78dd2f013184a1271643729611ca4793
Stamping Certificate
Download PDF (39.7 KB)
SHASUM Hash
acbe2e5b6e5b3385ff524e66876d1d4d72dd6ff4f45b61a84268f79e10773904
QR code for PSP10038

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