Huautla-2-redo-SW

PSP 10030

DNA Source: SporeWorks

General Information

Accession Date
May 11, 2021
Report Type
Whole-Genome Sequencing
DNA Source Website
sporeworks.com

Genetic Information

These charts represent the Illumina sequence coverage over the Psilocybin synthase genes.

Psilocybin Synthase Gene Coverage

Learn more about read coverage plots.

Read Coverage
No. of Contigs (>= 25K bp)
412
No. of Contigs (>= 50K bp)
205
Total Length (>= 25K bp)
28,949,662
Total Length (>= 50K bp)
21,468,140
Total Contigs
3,119
Largest Contig
476,130
Total Length
40,372,367
GC (%)
46.13
N50
53,753

Learn more about blob plots.

Blob Plot

Variants

PsiT1 c.362A>G p.Glu121Gly missense variant & splice region variant moderate CM039007.1 1663786

IGV: Start, Jump

A/G
PsiT1 c.640A>C p.Ile214Leu missense variant moderate CM039007.1 1664184

IGV: Start, Jump

A/C
PsiT1 c.1735G>A p.Val579Ile missense variant moderate CM039007.1 1666040

IGV: Start, Jump

G/A
PsiT1 c.1736T>C p.Val579Ala missense variant moderate CM039007.1 1666041

IGV: Start, Jump

T/C
PsiT1 c.2254A>G p.Arg752Gly missense variant moderate CM039007.1 1666622

IGV: Start, Jump

A/G
PsiH c.20C>T p.Ser7Phe missense variant moderate CM039007.1 1667530

IGV: Start, Jump

C/T
PsiM c.305G>A p.Arg102Lys missense variant moderate CM039007.1 1674573

IGV: Start, Jump

C/T
PsiD c.617G>A p.Gly206Asp missense variant moderate CM039007.1 1676885

IGV: Start, Jump

C/T
PsiD c.616G>A p.Gly206Ser missense variant moderate CM039007.1 1676886

IGV: Start, Jump

C/T
PsiD c.66G>T p.Leu22Phe missense variant moderate CM039007.1 1677485

IGV: Start, Jump

C/A

Nearest genetic relatives (All Samples)

0 0.033 0.067 0.100 0.133
  1. 0.025 Huautla-3-redo-SW (PSP10031)
  2. 0.025 Huautla-3-PS (PSP10005)
  3. 0.033 Maui-2-PS (PSP10041)
  4. 0.036 Maui-3-PS (PSP10042)
  5. 0.036 Maui-1-PS (PSP10040)
  6. 0.039 Golden-Teacher (PSP10089)
  7. 0.039 GoldenTeacher-3-SW (PSP10029)
  8. 0.040 Ecuador-3-SW (PSP10025)
  9. 0.041 Bplus-2-redo-SW (PSP10015)
  10. 0.042 Bplus-1-redo-SW (PSP10014)
  11. 0.043 Bplus-3-redo-SW (PSP10016)
  12. 0.043 Ecuador-3-PS (PSP10061)
  13. 0.044 Z-strain-3-PS (PSP10084)
  14. 0.045 GoldenTeacher-2-SW (PSP10028)
  15. 0.046 PES-2-SW (PSP10008)
  16. 0.046 GoldenTeacher-1-SW (PSP10027)
  17. 0.050 Puerto-Rican-ITW (PSP10078)
  18. 0.052 GoldenCoast-BAF-A2-UM (PSP10106)
  19. 0.053 Bplus-3-PS (PSP10001)
  20. 0.053 GoldenCoast-BAF-B1-UM (PSP10107)

Most genetically distant strains (All Samples)

0 0.183 0.367 0.550 0.733
  1. 0.721 Penvy-1-PS (PSP10045)
  2. 0.721 Penvy-Col5-PS (PSP10044)
  3. 0.721 Penvy-Col4-PS (PSP10043)
  4. 0.720 Penvy-2-SW (PSP10075)
  5. 0.666 Costa-Rica-1-redo-SW (PSP10022)
  6. 0.662 Costa-Rica-2-redo-SW (PSP10023)
  7. 0.650 Treasure-coast-1-PS (PSP10054)
  8. 0.649 Treasure-coast-2-PS (PSP10055)
  9. 0.649 Treasure-coast-3-PS (PSP10056)
  10. 0.648 Treasure-Coast-2-Mush (PSP10082)
  11. 0.631 Costa-Rica-3-redo-SW (PSP10024)
  12. 0.617 Bplus-ITW-WM (PSP10129)
  13. 0.616 Orissa-India-1-Mush (PSP10072)
  14. 0.610 Orissa-India-4-Mush (PSP10073)
  15. 0.608 Arenal-Volcano-1-Mush (PSP10059)
  16. 0.607 ColumbiaRust-1-SW (PSP10021)
  17. 0.603 Luminous-lucies-3-PS (PSP10033)
  18. 0.603 Luminous-lucies-2-PS (PSP10032)
  19. 0.603 Luminous-lucies-1-PS (PSP10034)
  20. 0.603 Roatan-Honduras-4-Mush (PSP10079)

Blockchain Registration Information

Transaction ID
6b7980d99863221494563edc4289b6dd4e35112ca8bb36091ef54b2ef8037490
Stamping Certificate
Download PDF (39.7 KB)
SHASUM Hash
fa339ec7ef7e42aadcfc083fd939e391a044453fbff26c0aa03eaeb6abb9955b
QR code for PSP10030

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