Arenal-Volcano-1-Mush

PSP 10059

DNA Source: Mushrooms.com

General Information

Accession Date
June 13, 2021
Report Type
Whole-Genome Sequencing
DNA Source Website
mushrooms.com

Genetic Information

These charts represent the Illumina sequence coverage over the Psilocybin synthase genes.

Psilocybin Synthase Gene Coverage

Learn more about read coverage plots.

Read Coverage
No. of Contigs (>= 25K bp)
412
No. of Contigs (>= 50K bp)
186
Total Length (>= 25K bp)
27,757,752
Total Length (>= 50K bp)
19,733,355
Total Contigs
5,928
Largest Contig
494,595
Total Length
43,480,779
GC (%)
46.02
N50
43,533

Learn more about blob plots.

Blob Plot

Variants

PsiR c.1031C>T p.Ala344Val missense variant moderate CM039007.1 1655743

IGV: Start, Jump

G/A
PsiT1 c.362A>G p.Glu121Gly missense variant & splice region variant moderate CM039007.1 1663786

IGV: Start, Jump

A/G
PsiT1 c.640A>C p.Ile214Leu missense variant moderate CM039007.1 1664184

IGV: Start, Jump

A/C
PsiT1 c.668C>G p.Ser223* stop gained high CM039007.1 1664264

IGV: Start, Jump

C/G
PsiT1 c.737C>T p.Thr246Ile missense variant moderate CM039007.1 1664333

IGV: Start, Jump

C/T
PsiT1 c.798A>T p.Arg266Ser missense variant moderate CM039007.1 1664394

IGV: Start, Jump

A/T
PsiT1 c.802C>A p.Leu268Ile missense variant moderate CM039007.1 1664398

IGV: Start, Jump

C/A
PsiT1 c.1156A>G p.Thr386Ala missense variant moderate CM039007.1 1664803

IGV: Start, Jump

A/G
PsiT1 c.1513A>G p.Ile505Val missense variant moderate CM039007.1 1665277

IGV: Start, Jump

A/G
PsiT1 c.1616A>G p.His539Arg missense variant moderate CM039007.1 1665560

IGV: Start, Jump

A/G
PsiT1 c.1626G>A p.Met542Ile missense variant moderate CM039007.1 1665570

IGV: Start, Jump

G/A
PsiT1 c.1714A>G p.Asn572Asp missense variant moderate CM039007.1 1665658

IGV: Start, Jump

A/G
PsiT1 c.1720+1G>T splice donor variant & intron variant high CM039007.1 1665665

IGV: Start, Jump

G/T
PsiT1 c.1735G>A p.Val579Ile missense variant moderate CM039007.1 1666040

IGV: Start, Jump

G/A
PsiT1 c.1736T>C p.Val579Ala missense variant moderate CM039007.1 1666041

IGV: Start, Jump

T/C
PsiT1 c.2038T>G p.Ser680Ala missense variant moderate CM039007.1 1666406

IGV: Start, Jump

T/G
PsiT1 c.2126T>C p.Val709Ala missense variant moderate CM039007.1 1666494

IGV: Start, Jump

T/C
PsiT1 c.2254A>G p.Arg752Gly missense variant moderate CM039007.1 1666622

IGV: Start, Jump

A/G
PsiM c.305G>A p.Arg102Lys missense variant moderate CM039007.1 1674573

IGV: Start, Jump

C/T
PsiM c.129A>T p.Glu43Asp missense variant moderate CM039007.1 1674903

IGV: Start, Jump

T/A
PsiD c.66G>T p.Leu22Phe missense variant moderate CM039007.1 1677485

IGV: Start, Jump

C/A

Nearest genetic relatives (All Samples)

0 0.083 0.167 0.250 0.333
  1. 0.021 Luminous-lucies-2-PS (PSP10032)
  2. 0.022 Luminous-lucies-3-PS (PSP10033)
  3. 0.022 Luminous-lucies-1-PS (PSP10034)
  4. 0.295 Roatan-Honduras-4-Mush (PSP10079)
  5. 0.311 Treasure-Coast-2-Mush (PSP10082)
  6. 0.312 Treasure-coast-3-PS (PSP10056)
  7. 0.312 Treasure-coast-1-PS (PSP10054)
  8. 0.312 Treasure-coast-2-PS (PSP10055)
  9. 0.314 Costa-Rica-3-redo-SW (PSP10024)
  10. 0.315 ColumbiaRust-1-SW (PSP10021)
  11. 0.319 Bplus-ITW-WM (PSP10129)
  12. 0.322 MGC 2016 unknown strain (PSP10012)
  13. 0.328 Penvy-2-SW (PSP10075)
  14. 0.328 Penvy-Col5-PS (PSP10044)
  15. 0.328 Penvy-1-PS (PSP10045)
  16. 0.328 Penvy-Col4-PS (PSP10043)
  17. 0.330 Tosohatchee-print-ITW (PSP10081)
  18. 0.330 Chitwan-1-SW (PSP10002)
  19. 0.331 Z-strain-1-Mush (PSP10083)
  20. 0.332 Costa-Rica-1-redo-SW (PSP10022)

Most genetically distant strains (All Samples)

0 0.158 0.317 0.475 0.633
  1. 0.618 Bplus-3-PS (PSP10001)
  2. 0.616 GoldenCoast-BAF-A1-UM (PSP10105)
  3. 0.615 GoldenCoast-BAF-A2-UM (PSP10106)
  4. 0.614 Orissa-India-ITW (PSP10071)
  5. 0.612 Puerto-Rican-ITW (PSP10078)
  6. 0.612 GoldenCoast-BAF-B1-UM (PSP10107)
  7. 0.612 GoldenCoast-BAF-B2-UM (PSP10108)
  8. 0.612 Bplus (PSP10088)
  9. 0.611 Bplus-3-redo-SW (PSP10016)
  10. 0.610 HUA-Early (PSP10092)
  11. 0.610 McKennaii-1-PS (PSP10069)
  12. 0.610 True-Albino-Teacher-ITW-WM (PSP10140)
  13. 0.610 Bplus-1-redo-SW (PSP10014)
  14. 0.610 Bplus-2-redo-SW (PSP10015)
  15. 0.610 Gulf-Coast-BAF (PSP10090)
  16. 0.609 Gulf-Coast (PSP10091)
  17. 0.608 Huautla-2-redo-SW (PSP10030)
  18. 0.608 Ecuador-3-SW (PSP10025)
  19. 0.607 GoldenTeacher-3-SW (PSP10029)
  20. 0.607 Maui-2-PS (PSP10041)

Blockchain Registration Information

Transaction ID
9ff9984be1830085703f7a5b75898e0deba84fc3d9df6dd10bfcf95f24b662af
Stamping Certificate
Download PDF (39.6 KB)
SHASUM Hash
80d0764d2fce8c19de6a0e9a510efd7e32ee265018d34825ee0e1db72aca2d49
QR code for PSP10059

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