Arenal-Volcano-1-Mush
PSP 10059
DNA Source: Mushrooms.com
General Information
- Accession Date
- June 13, 2021
- Report Type
- Whole-Genome Sequencing
- DNA Source Website
- mushrooms.com
Genetic Information
File Downloads
These charts represent the Illumina sequence coverage over the Psilocybin synthase genes.
- No. of Contigs (>= 25K bp)
- 411
- No. of Contigs (>= 50K bp)
- 186
- Total Length (>= 25K bp)
- 27,880,081
- Total Length (>= 50K bp)
- 19,971,400
- Total Contigs
- 5,606
- Largest Contig
- 527,182
- Total Length
- 43,252,179
- GC (%)
- 46.03
- N50
- 44,205
Variants
| PsiR | c.1031C>T | p.Ala344Val | missense variant | moderate | CM039007.1 | 1655743 | G/A |
| PsiT1 | c.362A>G | p.Glu121Gly | missense variant & splice region variant | moderate | CM039007.1 | 1663786 | A/G |
| PsiT1 | c.640A>C | p.Ile214Leu | missense variant | moderate | CM039007.1 | 1664184 | A/C |
| PsiT1 | c.668C>G | p.Ser223* | stop gained | high | CM039007.1 | 1664264 | C/G |
| PsiT1 | c.737C>T | p.Thr246Ile | missense variant | moderate | CM039007.1 | 1664333 | C/T |
| PsiT1 | c.798A>T | p.Arg266Ser | missense variant | moderate | CM039007.1 | 1664394 | A/T |
| PsiT1 | c.802C>A | p.Leu268Ile | missense variant | moderate | CM039007.1 | 1664398 | C/A |
| PsiT1 | c.1156A>G | p.Thr386Ala | missense variant | moderate | CM039007.1 | 1664803 | A/G |
| PsiT1 | c.1513A>G | p.Ile505Val | missense variant | moderate | CM039007.1 | 1665277 | A/G |
| PsiT1 | c.1616A>G | p.His539Arg | missense variant | moderate | CM039007.1 | 1665560 | A/G |
| PsiT1 | c.1626G>A | p.Met542Ile | missense variant | moderate | CM039007.1 | 1665570 | G/A |
| PsiT1 | c.1714A>G | p.Asn572Asp | missense variant | moderate | CM039007.1 | 1665658 | A/G |
| PsiT1 | c.1720+1G>T | splice donor variant & intron variant | high | CM039007.1 | 1665665 | G/T | |
| PsiT1 | c.1735G>A | p.Val579Ile | missense variant | moderate | CM039007.1 | 1666040 | G/A |
| PsiT1 | c.1736T>C | p.Val579Ala | missense variant | moderate | CM039007.1 | 1666041 | T/C |
| PsiT1 | c.2038T>G | p.Ser680Ala | missense variant | moderate | CM039007.1 | 1666406 | T/G |
| PsiT1 | c.2126T>C | p.Val709Ala | missense variant | moderate | CM039007.1 | 1666494 | T/C |
| PsiT1 | c.2254A>G | p.Arg752Gly | missense variant | moderate | CM039007.1 | 1666622 | A/G |
| PsiM | c.305G>A | p.Arg102Lys | missense variant | moderate | CM039007.1 | 1674573 | C/T |
| PsiM | c.129A>T | p.Glu43Asp | missense variant | moderate | CM039007.1 | 1674903 | T/A |
| PsiD | c.66G>T | p.Leu22Phe | missense variant | moderate | CM039007.1 | 1677485 | C/A |
Nearest genetic relatives (All Samples)
0
0.083
0.167
0.250
0.333
- 0.021 Luminous-lucies-2-PS (PSP10032)
- 0.022 Luminous-lucies-3-PS (PSP10033)
- 0.022 Luminous-lucies-1-PS (PSP10034)
- 0.295 Roatan-Honduras-4-Mush (PSP10079)
- 0.311 Treasure-Coast-2-Mush (PSP10082)
- 0.312 Treasure-coast-3-PS (PSP10056)
- 0.312 Treasure-coast-1-PS (PSP10054)
- 0.312 Treasure-coast-2-PS (PSP10055)
- 0.314 Costa-Rica-3-redo-SW (PSP10024)
- 0.315 ColumbiaRust-1-SW (PSP10021)
- 0.319 Bplus-ITW-WM (PSP10129)
- 0.322 MGC 2016 unknown strain (PSP10012)
- 0.328 Penvy-2-SW (PSP10075)
- 0.328 Penvy-Col5-PS (PSP10044)
- 0.328 Penvy-1-PS (PSP10045)
- 0.328 Penvy-Col4-PS (PSP10043)
- 0.330 Tosohatchee-print-ITW (PSP10081)
- 0.330 Chitwan-1-SW (PSP10002)
- 0.331 Z-strain-1-Mush (PSP10083)
- 0.332 Costa-Rica-1-redo-SW (PSP10022)
Most genetically distant strains (All Samples)
0
0.158
0.317
0.475
0.633
- 0.618 Bplus-3-PS (PSP10001)
- 0.616 GoldenCoast-BAF-A1-UM (PSP10105)
- 0.615 GoldenCoast-BAF-A2-UM (PSP10106)
- 0.614 Orissa-India-ITW (PSP10071)
- 0.612 Puerto-Rican-ITW (PSP10078)
- 0.612 GoldenCoast-BAF-B1-UM (PSP10107)
- 0.612 GoldenCoast-BAF-B2-UM (PSP10108)
- 0.612 Bplus (PSP10088)
- 0.611 Bplus-3-redo-SW (PSP10016)
- 0.610 HUA-Early (PSP10092)
- 0.610 McKennaii-1-PS (PSP10069)
- 0.610 True-Albino-Teacher-ITW-WM (PSP10140)
- 0.610 Bplus-1-redo-SW (PSP10014)
- 0.610 Bplus-2-redo-SW (PSP10015)
- 0.610 Gulf-Coast-BAF (PSP10090)
- 0.609 Gulf-Coast (PSP10091)
- 0.608 Huautla-2-redo-SW (PSP10030)
- 0.608 Ecuador-3-SW (PSP10025)
- 0.607 GoldenTeacher-3-SW (PSP10029)
- 0.607 Maui-2-PS (PSP10041)
Blockchain Registration Information
- Transaction ID
-
9ff9984be1830085
703f7a5b75898e0d eba84fc3d9df6dd1 0bfcf95f24b662af - Stamping Certificate
- Download PDF (39.6 KB)
- SHASUM Hash
-
80d0764d2fce8c19de6a0e9a510efd7e 32ee265018d34825 ee0e1db72aca2d49
